Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 COL6A4P2-205ENST00000509855 506 ntBASIC6.13□□□□□ -1.43
BRF2Q9HAW0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.13□□□□□ -1.43
BRF2Q9HAW0 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.13□□□□□ -1.43
BRF2Q9HAW0 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.13□□□□□ -1.43
BRF2Q9HAW0 AC084851.2-201ENST00000530377 364 ntBASIC6.13□□□□□ -1.43
BRF2Q9HAW0 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.13□□□□□ -1.43
BRF2Q9HAW0 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.13□□□□□ -1.43
BRF2Q9HAW0 AC068408.1-201ENST00000577406 1144 ntBASIC6.13□□□□□ -1.43
BRF2Q9HAW0 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.13□□□□□ -1.43
BRF2Q9HAW0 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.13□□□□□ -1.43
BRF2Q9HAW0 AL008723.3-201ENST00000608926 449 ntBASIC6.13□□□□□ -1.43
BRF2Q9HAW0 AC104307.1-201ENST00000616142 196 ntBASIC6.13□□□□□ -1.43
BRF2Q9HAW0 AC009032.1-201ENST00000617574 431 ntBASIC6.13□□□□□ -1.43
BRF2Q9HAW0 MIR6849-201ENST00000618543 69 ntBASIC6.13□□□□□ -1.43
BRF2Q9HAW0 AC007204.1-201ENST00000621794 555 ntBASIC6.13□□□□□ -1.43
BRF2Q9HAW0 KYNUP2-201ENST00000582280 1329 ntBASIC6.13□□□□□ -1.43
BRF2Q9HAW0 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BRF2Q9HAW0 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
BRF2Q9HAW0 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.13□□□□□ -1.43
BRF2Q9HAW0 BIN2P1-201ENST00000504996 1530 ntBASIC6.13□□□□□ -1.43
BRF2Q9HAW0 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRF2Q9HAW0 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.13□□□□□ -1.43
BRF2Q9HAW0 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BRF2Q9HAW0 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.13□□□□□ -1.43
BRF2Q9HAW0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.13□□□□□ -1.43
BRF2Q9HAW0 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRF2Q9HAW0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 RN7SKP237-201ENST00000364663 301 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 RNU1-84P-201ENST00000365447 164 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 LCN1P2-201ENST00000372030 223 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 RN7SKP281-201ENST00000410472 352 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 RNA5SP155-201ENST00000411154 129 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 TMA16P2-201ENST00000413187 601 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 AC013470.3-201ENST00000420252 1194 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 FANCD2P2-201ENST00000437591 1400 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 AC234771.4-201ENST00000441416 730 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 MORF4L1P4-201ENST00000450245 976 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 AL133399.1-201ENST00000527476 298 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 AC090115.2-201ENST00000548060 883 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 AC011503.2-201ENST00000594230 1500 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 AC022726.2-201ENST00000634673 547 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 AL163152.1-201ENST00000642001 374 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.12□□□□□ -1.43
BRF2Q9HAW0 AC092692.1-201ENST00000623625 2595 ntBASIC6.12□□□□□ -1.43
BRF2Q9HAW0 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 ZNF402P-201ENST00000404435 3100 ntBASIC6.11□□□□□ -1.43
BRF2Q9HAW0 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 SNORA7A-201ENST00000384765 139 ntBASIC6.11□□□□□ -1.43
BRF2Q9HAW0 RN7SKP221-201ENST00000410420 301 ntBASIC6.11□□□□□ -1.43
BRF2Q9HAW0 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 RPS17P17-201ENST00000419392 409 ntBASIC6.11□□□□□ -1.43
BRF2Q9HAW0 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 AL645939.3-201ENST00000435408 225 ntBASIC6.11□□□□□ -1.43
BRF2Q9HAW0 GAPDHP37-201ENST00000442317 968 ntBASIC6.11□□□□□ -1.43
BRF2Q9HAW0 AC092967.1-201ENST00000449016 481 ntBASIC6.11□□□□□ -1.43
BRF2Q9HAW0 RPL31P11-202ENST00000454082 372 ntBASIC6.11□□□□□ -1.43
BRF2Q9HAW0 TAAR4P-201ENST00000454843 1039 ntBASIC6.11□□□□□ -1.43
BRF2Q9HAW0 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.11□□□□□ -1.43
BRF2Q9HAW0 AC105918.1-201ENST00000474399 838 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms