Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC138915.4-201ENST00000565549 4147 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 ANKRD36P1-201ENST00000344424 659 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 RN7SKP174-201ENST00000363803 330 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 RNU6-481P-201ENST00000384194 107 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 RPS3AP24-201ENST00000407896 734 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 RNA5SP177-201ENST00000410122 107 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 MTCO1P52-201ENST00000433928 531 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AL354983.1-201ENST00000434580 906 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC092393.1-201ENST00000439625 742 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AL161626.1-201ENST00000441480 490 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 OTX2P1-201ENST00000450956 354 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 RPL23AP23-201ENST00000452590 471 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 RPS6P2-201ENST00000454208 705 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC234771.3-201ENST00000454984 622 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 RPS4XP19-201ENST00000460237 736 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 BZW1P2-201ENST00000473537 826 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 PPP1R2P6-201ENST00000478565 588 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC092593.2-201ENST00000513866 913 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 IGLV1-62-201ENST00000518003 441 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC025918.2-201ENST00000558683 763 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 MTND4LP24-201ENST00000572277 291 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC012417.1-201ENST00000582307 1039 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AP002906.1-201ENST00000603405 233 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC005034.4-201ENST00000603612 899 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC024060.1-201ENST00000607052 494 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC012510.1-201ENST00000607946 759 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC027271.1-201ENST00000610270 610 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC122133.1-201ENST00000613964 233 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC007204.2-201ENST00000615022 616 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AL121985.3-201ENST00000620690 523 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC243725.1-201ENST00000637164 436 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
SSBP3Q9BWW4 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSBP3Q9BWW4 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms