Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 OR52E7P-201ENST00000452394 933 ntBASIC8.78□□□□□ -1
SIN3AQ96ST3 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC8.78□□□□□ -1
SIN3AQ96ST3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC8.78□□□□□ -1
SIN3AQ96ST3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC8.78□□□□□ -1
SIN3AQ96ST3 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.78□□□□□ -1
SIN3AQ96ST3 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC8.78□□□□□ -1
SIN3AQ96ST3 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.78□□□□□ -1
SIN3AQ96ST3 MIR132-201ENST00000591554 101 ntBASIC8.78□□□□□ -1
SIN3AQ96ST3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC8.78□□□□□ -1
SIN3AQ96ST3 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
SIN3AQ96ST3 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SIN3AQ96ST3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC8.78□□□□□ -1
SIN3AQ96ST3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SIN3AQ96ST3 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
SIN3AQ96ST3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.78□□□□□ -1
SIN3AQ96ST3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
SIN3AQ96ST3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
SIN3AQ96ST3 OR2AH1P-202ENST00000641232 2744 ntBASIC8.77□□□□□ -1.01
SIN3AQ96ST3 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SIN3AQ96ST3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SIN3AQ96ST3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SIN3AQ96ST3 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.77□□□□□ -1.01
SIN3AQ96ST3 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC8.77□□□□□ -1.01
SIN3AQ96ST3 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC8.77□□□□□ -1.01
SIN3AQ96ST3 RNA5SP273-201ENST00000362484 113 ntBASIC8.77□□□□□ -1.01
SIN3AQ96ST3 CRP-204ENST00000368112 787 ntTSL 2 BASIC8.77□□□□□ -1.01
SIN3AQ96ST3 SNORA70H-201ENST00000383910 135 ntBASIC8.77□□□□□ -1.01
SIN3AQ96ST3 SNORA70J-201ENST00000384182 135 ntBASIC8.77□□□□□ -1.01
SIN3AQ96ST3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SIN3AQ96ST3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC8.77□□□□□ -1.01
SIN3AQ96ST3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC8.77□□□□□ -1.01
SIN3AQ96ST3 RPS12P17-201ENST00000438591 377 ntBASIC8.77□□□□□ -1.01
SIN3AQ96ST3 RPL23AP60-201ENST00000450011 454 ntBASIC8.77□□□□□ -1.01
SIN3AQ96ST3 AC023194.2-201ENST00000465398 406 ntBASIC8.77□□□□□ -1.01
SIN3AQ96ST3 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.77□□□□□ -1.01
SIN3AQ96ST3 OR7E158P-201ENST00000524483 910 ntBASIC8.77□□□□□ -1.01
SIN3AQ96ST3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC8.77□□□□□ -1.01
SIN3AQ96ST3 AC108673.3-201ENST00000609183 335 ntBASIC8.77□□□□□ -1.01
SIN3AQ96ST3 AC018659.2-201ENST00000624690 715 ntBASIC8.77□□□□□ -1.01
SIN3AQ96ST3 WBP11P1-201ENST00000562560 1931 ntBASIC8.77□□□□□ -1.01
SIN3AQ96ST3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SIN3AQ96ST3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SIN3AQ96ST3 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
SIN3AQ96ST3 AP003486.1-201ENST00000525716 3994 ntBASIC8.76□□□□□ -1.01
SIN3AQ96ST3 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.76□□□□□ -1.01
SIN3AQ96ST3 MTCO1P28-201ENST00000574177 1528 ntBASIC8.76□□□□□ -1.01
SIN3AQ96ST3 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SIN3AQ96ST3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
SIN3AQ96ST3 HMGA1P8-201ENST00000414130 321 ntBASIC8.76□□□□□ -1.01
SIN3AQ96ST3 RPS14P4-201ENST00000415880 418 ntBASIC8.76□□□□□ -1.01
SIN3AQ96ST3 ATP5A1P8-201ENST00000423669 1291 ntBASIC8.76□□□□□ -1.01
SIN3AQ96ST3 AC069154.1-201ENST00000432914 542 ntBASIC8.76□□□□□ -1.01
SIN3AQ96ST3 PPIAP27-201ENST00000453800 265 ntBASIC8.76□□□□□ -1.01
SIN3AQ96ST3 AC098847.1-201ENST00000473094 348 ntBASIC8.76□□□□□ -1.01
SIN3AQ96ST3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC8.76□□□□□ -1.01
SIN3AQ96ST3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8.76□□□□□ -1.01
SIN3AQ96ST3 AC027369.2-201ENST00000528030 440 ntBASIC8.76□□□□□ -1.01
SIN3AQ96ST3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC8.76□□□□□ -1.01
SIN3AQ96ST3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC8.76□□□□□ -1.01
SIN3AQ96ST3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC8.76□□□□□ -1.01
SIN3AQ96ST3 AC008507.3-201ENST00000585753 472 ntBASIC8.76□□□□□ -1.01
SIN3AQ96ST3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC8.76□□□□□ -1.01
SIN3AQ96ST3 Six3os1_2.1-201ENST00000616963 217 ntBASIC8.76□□□□□ -1.01
SIN3AQ96ST3 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SIN3AQ96ST3 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.76□□□□□ -1.01
SIN3AQ96ST3 AC079753.1-201ENST00000623243 3868 ntBASIC8.76□□□□□ -1.01
SIN3AQ96ST3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
SIN3AQ96ST3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SIN3AQ96ST3 USP40-202ENST00000409945 1946 ntTSL 2 BASIC8.76□□□□□ -1.01
SIN3AQ96ST3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SIN3AQ96ST3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 AC022164.1-201ENST00000568767 2673 ntBASIC8.75□□□□□ -1.01
SIN3AQ96ST3 AF287957.1-201ENST00000607368 1595 ntBASIC8.75□□□□□ -1.01
SIN3AQ96ST3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 CAP1P2-201ENST00000417455 1409 ntBASIC8.75□□□□□ -1.01
SIN3AQ96ST3 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 OR10R3P-201ENST00000361688 942 ntBASIC8.75□□□□□ -1.01
SIN3AQ96ST3 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 LYPLA1P3-201ENST00000402650 695 ntBASIC8.75□□□□□ -1.01
SIN3AQ96ST3 VN1R12P-201ENST00000403778 876 ntBASIC8.75□□□□□ -1.01
SIN3AQ96ST3 AL451046.1-201ENST00000406097 534 ntBASIC8.75□□□□□ -1.01
SIN3AQ96ST3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 AL731534.1-201ENST00000434711 269 ntBASIC8.75□□□□□ -1.01
SIN3AQ96ST3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 AL445466.1-201ENST00000448432 357 ntBASIC8.75□□□□□ -1.01
SIN3AQ96ST3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 MIR4271-201ENST00000582451 67 ntBASIC8.75□□□□□ -1.01
SIN3AQ96ST3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SIN3AQ96ST3 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms