Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 RN7SKP183-201ENST00000517169 324 ntBASIC6.24□□□□□ -1.41
VPS35Q96QK1 AP005639.1-201ENST00000526939 192 ntBASIC6.24□□□□□ -1.41
VPS35Q96QK1 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.24□□□□□ -1.41
VPS35Q96QK1 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.24□□□□□ -1.41
VPS35Q96QK1 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.24□□□□□ -1.41
VPS35Q96QK1 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.24□□□□□ -1.41
VPS35Q96QK1 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VPS35Q96QK1 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.24□□□□□ -1.41
VPS35Q96QK1 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
VPS35Q96QK1 DYNLL1P1-201ENST00000595442 269 ntBASIC6.24□□□□□ -1.41
VPS35Q96QK1 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.24□□□□□ -1.41
VPS35Q96QK1 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.24□□□□□ -1.41
VPS35Q96QK1 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.24□□□□□ -1.41
VPS35Q96QK1 AL135999.3-201ENST00000610501 812 ntBASIC6.24□□□□□ -1.41
VPS35Q96QK1 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.24□□□□□ -1.41
VPS35Q96QK1 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.24□□□□□ -1.41
VPS35Q96QK1 AP001885.1-201ENST00000621658 558 ntBASIC6.24□□□□□ -1.41
VPS35Q96QK1 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VPS35Q96QK1 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.24□□□□□ -1.41
VPS35Q96QK1 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.24□□□□□ -1.41
VPS35Q96QK1 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.24□□□□□ -1.41
VPS35Q96QK1 BIN2P1-201ENST00000504996 1530 ntBASIC6.24□□□□□ -1.41
VPS35Q96QK1 AC090181.3-201ENST00000624777 1514 ntBASIC6.24□□□□□ -1.41
VPS35Q96QK1 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VPS35Q96QK1 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VPS35Q96QK1 GUCY1B2-204ENST00000531898 1979 ntBASIC6.24□□□□□ -1.41
VPS35Q96QK1 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VPS35Q96QK1 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
VPS35Q96QK1 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VPS35Q96QK1 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS35Q96QK1 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 AL592429.1-201ENST00000403909 1473 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VPS35Q96QK1 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS35Q96QK1 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VPS35Q96QK1 PPBPP2-201ENST00000513150 1362 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 AC119674.1-213ENST00000641177 1386 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VPS35Q96QK1 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 RNA5SP346-201ENST00000363541 121 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 RN7SKP171-201ENST00000364417 303 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 SNORA70.9-201ENST00000384370 135 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 AL139158.1-201ENST00000424719 340 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 RPS7P14-201ENST00000426405 583 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 AL645936.1-201ENST00000441979 518 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 AC009237.1-201ENST00000442127 744 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 OR13K1P-201ENST00000444577 975 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 AC092967.1-201ENST00000449016 481 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 AC114982.2-201ENST00000461396 358 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 KATNBL1P4-201ENST00000503545 918 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 ZNF519P4-201ENST00000514008 125 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 AC036111.2-201ENST00000533247 901 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 MIR4420-201ENST00000583944 77 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 SMIM12P1-201ENST00000603004 274 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 AC009779.8-202ENST00000607990 932 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 AC111152.1-202ENST00000635848 339 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 AL596275.2-207ENST00000641188 675 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS35Q96QK1 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS35Q96QK1 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 AC105749.1-201ENST00000631338 2008 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS35Q96QK1 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS35Q96QK1 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS35Q96QK1 AC011369.2-201ENST00000624423 1567 ntBASIC6.23□□□□□ -1.41
VPS35Q96QK1 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS35Q96QK1 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS35Q96QK1 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS35Q96QK1 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS35Q96QK1 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.22□□□□□ -1.41
VPS35Q96QK1 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
VPS35Q96QK1 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
VPS35Q96QK1 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms