Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 AC096861.1-201ENST00000616652 240 ntBASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 LINC01739-205ENST00000641890 573 ntBASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 AC013488.1-201ENST00000526618 1838 ntBASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 POLR1B-217ENST00000541869 5059 ntTSL 2 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 U3.36-201ENST00000408418 213 ntBASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 AC108075.1-201ENST00000424692 529 ntBASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC4.99□□□□□ -1.61
CSMD1Q96PZ7 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AC127024.8-201ENST00000623719 2094 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 PPIP5K1-202ENST00000348806 5433 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AC034236.1-201ENST00000469891 373 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 OR7E157P-201ENST00000494376 911 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 MIR4480-201ENST00000582492 71 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AC020910.2-201ENST00000603635 610 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AL359955.1-201ENST00000455242 3275 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 THSD7B-203ENST00000413152 5846 ntTSL 5 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AC068538.1-201ENST00000376856 336 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 NENFP1-201ENST00000419476 466 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 CYP4F32P-201ENST00000426492 504 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 TRGV7-201ENST00000427089 353 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 NUTF2P7-201ENST00000453086 375 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AC106800.3-201ENST00000511389 308 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 MIR1254-2-201ENST00000579553 63 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 EIF3FP1-201ENST00000613970 806 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AC087269.2-201ENST00000641764 975 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AC005725.1-201ENST00000577346 2607 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AC007485.2-201ENST00000623493 1667 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 NCAM1-229ENST00000621518 4922 ntTSL 5 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AC122718.1-201ENST00000439448 744 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 FAM133DP-201ENST00000464802 691 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 RPEP1-201ENST00000504507 658 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 MIR3189-201ENST00000578735 73 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 AP002799.1-201ENST00000623552 423 ntBASIC4.98□□□□□ -1.61
CSMD1Q96PZ7 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 AC022819.1-201ENST00000563495 3910 ntBASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC4.97□□□□□ -1.61
CSMD1Q96PZ7 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms