Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC006338.1-201ENST00000618453 749 ntBASIC8.78□□□□□ -1
TRIM47Q96LD4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC8.78□□□□□ -1
TRIM47Q96LD4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC8.78□□□□□ -1
TRIM47Q96LD4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC8.78□□□□□ -1
TRIM47Q96LD4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC8.78□□□□□ -1
TRIM47Q96LD4 SAMMSON-209ENST00000641222 1100 ntBASIC8.78□□□□□ -1
TRIM47Q96LD4 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
TRIM47Q96LD4 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.78□□□□□ -1
TRIM47Q96LD4 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
TRIM47Q96LD4 API5P1-201ENST00000424316 1510 ntBASIC8.78□□□□□ -1
TRIM47Q96LD4 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
TRIM47Q96LD4 AC104447.1-201ENST00000624214 2124 ntBASIC8.78□□□□□ -1
TRIM47Q96LD4 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC8.78□□□□□ -1
TRIM47Q96LD4 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.78□□□□□ -1
TRIM47Q96LD4 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC8.78□□□□□ -1
TRIM47Q96LD4 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.78□□□□□ -1
TRIM47Q96LD4 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
TRIM47Q96LD4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC8.78□□□□□ -1
TRIM47Q96LD4 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC8.78□□□□□ -1
TRIM47Q96LD4 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.78□□□□□ -1
TRIM47Q96LD4 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
TRIM47Q96LD4 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
TRIM47Q96LD4 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.77□□□□□ -1
TRIM47Q96LD4 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC8.77□□□□□ -1
TRIM47Q96LD4 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 RBMX2P2-201ENST00000257020 946 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 RPL24P4-201ENST00000326586 421 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 SNORA73B-201ENST00000363217 204 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 RNU6-468P-201ENST00000384003 109 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 H2AFZP3-201ENST00000394213 387 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 RAB5CP1-201ENST00000395972 580 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 RPS7P2-201ENST00000435134 607 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AL662791.1-201ENST00000441992 928 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC044797.1-201ENST00000445744 679 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 CFTRP1-201ENST00000456646 183 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 MARK2P8-201ENST00000476069 952 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC084878.1-201ENST00000480555 648 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 NDUFA5P2-201ENST00000519723 344 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 BTF3P1-201ENST00000522014 495 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 NDUFA3P2-201ENST00000531434 232 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AL157394.1-201ENST00000562983 1224 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 RN7SL426P-201ENST00000579106 295 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC092681.3-201ENST00000609463 678 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC011472.4-201ENST00000615848 491 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 U4.5-201ENST00000617137 123 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC009704.2-201ENST00000618739 483 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC025287.2-201ENST00000621911 668 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC138627.1-203ENST00000641872 1680 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 EEF1A1P28-201ENST00000450915 1403 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC006026.1-201ENST00000444025 1803 ntBASIC8.77□□□□□ -1.01
TRIM47Q96LD4 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
TRIM47Q96LD4 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms