Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.34□□□□□ -1.55
AP3S1Q92572 RPL7P14-201ENST00000449851 741 ntBASIC5.34□□□□□ -1.55
AP3S1Q92572 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.34□□□□□ -1.55
AP3S1Q92572 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AP3S1Q92572 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.34□□□□□ -1.55
AP3S1Q92572 CCDC11P1-201ENST00000503137 1162 ntBASIC5.34□□□□□ -1.55
AP3S1Q92572 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.34□□□□□ -1.55
AP3S1Q92572 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.34□□□□□ -1.55
AP3S1Q92572 IGLVI-70-201ENST00000523272 390 ntBASIC5.34□□□□□ -1.55
AP3S1Q92572 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC5.34□□□□□ -1.55
AP3S1Q92572 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC5.34□□□□□ -1.55
AP3S1Q92572 AC069240.2-201ENST00000550242 609 ntBASIC5.34□□□□□ -1.55
AP3S1Q92572 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AP3S1Q92572 CIPC-206ENST00000555611 599 ntTSL 4 BASIC5.34□□□□□ -1.55
AP3S1Q92572 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.34□□□□□ -1.55
AP3S1Q92572 MIR3689C-201ENST00000581239 72 ntBASIC5.34□□□□□ -1.55
AP3S1Q92572 SNORD96A-201ENST00000606577 79 ntBASIC5.34□□□□□ -1.55
AP3S1Q92572 AL133481.2-203ENST00000607558 139 ntBASIC5.34□□□□□ -1.55
AP3S1Q92572 AC243830.3-201ENST00000616810 376 ntBASIC5.34□□□□□ -1.55
AP3S1Q92572 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.34□□□□□ -1.55
AP3S1Q92572 FKBP1AP4-201ENST00000631775 336 ntBASIC5.34□□□□□ -1.55
AP3S1Q92572 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP3S1Q92572 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP3S1Q92572 AC007842.1-201ENST00000597336 2039 ntBASIC5.34□□□□□ -1.55
AP3S1Q92572 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
AP3S1Q92572 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP3S1Q92572 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AP3S1Q92572 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.34□□□□□ -1.55
AP3S1Q92572 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AP3S1Q92572 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.56
AP3S1Q92572 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
AP3S1Q92572 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
AP3S1Q92572 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
AP3S1Q92572 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
AP3S1Q92572 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.34□□□□□ -1.56
AP3S1Q92572 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
AP3S1Q92572 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
AP3S1Q92572 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 AC092701.1-201ENST00000623627 1551 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
AP3S1Q92572 AC099654.3-201ENST00000447087 1546 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.33□□□□□ -1.56
AP3S1Q92572 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.33□□□□□ -1.56
AP3S1Q92572 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 RN7SKP185-201ENST00000362813 326 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 PCNAP3-201ENST00000397222 778 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 MYL6P5-201ENST00000412707 459 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC5.33□□□□□ -1.56
AP3S1Q92572 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.33□□□□□ -1.56
AP3S1Q92572 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.33□□□□□ -1.56
AP3S1Q92572 NIP7P1-201ENST00000433227 512 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.33□□□□□ -1.56
AP3S1Q92572 PRKAR1AP1-201ENST00000441422 1162 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 CCNJP1-201ENST00000450600 1149 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 AC022080.2-201ENST00000452932 533 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.33□□□□□ -1.56
AP3S1Q92572 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.33□□□□□ -1.56
AP3S1Q92572 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.33□□□□□ -1.56
AP3S1Q92572 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.33□□□□□ -1.56
AP3S1Q92572 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC5.33□□□□□ -1.56
AP3S1Q92572 SNORA70.11-201ENST00000515987 138 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 SNORA70.13-201ENST00000516116 138 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.33□□□□□ -1.56
AP3S1Q92572 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.33□□□□□ -1.56
AP3S1Q92572 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.33□□□□□ -1.56
AP3S1Q92572 TPRX1P1-201ENST00000557620 319 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.33□□□□□ -1.56
AP3S1Q92572 AC090826.1-203ENST00000569235 490 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.33□□□□□ -1.56
AP3S1Q92572 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC5.33□□□□□ -1.56
AP3S1Q92572 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.33□□□□□ -1.56
AP3S1Q92572 WDR45BP1-201ENST00000583470 1029 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC5.33□□□□□ -1.56
AP3S1Q92572 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.33□□□□□ -1.56
AP3S1Q92572 AL137067.2-201ENST00000621202 131 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
AP3S1Q92572 SNX18P12-201ENST00000624821 759 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 OR7A1P-202ENST00000641542 1158 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.33□□□□□ -1.56
AP3S1Q92572 AC011416.1-201ENST00000514947 1732 ntBASIC5.33□□□□□ -1.56
AP3S1Q92572 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
AP3S1Q92572 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.33□□□□□ -1.56
AP3S1Q92572 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S1Q92572 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms