Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 FUNDC2P3-201ENST00000334716 533 ntBASIC6.92□□□□□ -1.3
HERVK_113Q902F9 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 RN7SKP286-201ENST00000410894 299 ntBASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AL355355.1-201ENST00000442900 793 ntBASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AL163193.1-201ENST00000444895 788 ntBASIC6.92□□□□□ -1.3
HERVK_113Q902F9 RAD1P2-201ENST00000446414 663 ntBASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 RPL34P33-201ENST00000486062 334 ntBASIC6.92□□□□□ -1.3
HERVK_113Q902F9 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AC092121.1-201ENST00000569452 202 ntBASIC6.92□□□□□ -1.3
HERVK_113Q902F9 MIR4489-201ENST00000578869 62 ntBASIC6.92□□□□□ -1.3
HERVK_113Q902F9 MIR1273E-201ENST00000581165 102 ntBASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AC090236.2-201ENST00000587933 1101 ntBASIC6.92□□□□□ -1.3
HERVK_113Q902F9 VN1R81P-201ENST00000602085 372 ntBASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AL352984.2-201ENST00000611153 546 ntBASIC6.92□□□□□ -1.3
HERVK_113Q902F9 RNA5SP440-201ENST00000612665 119 ntBASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AC004477.3-201ENST00000614061 590 ntBASIC6.92□□□□□ -1.3
HERVK_113Q902F9 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.92□□□□□ -1.3
HERVK_113Q902F9 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HERVK_113Q902F9 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AC093278.2-201ENST00000564956 2485 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 OR4C1P-202ENST00000641065 1569 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 MTCO1P25-201ENST00000414449 1799 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 RN7SKP293-201ENST00000411389 296 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 RN7SL610P-201ENST00000463845 291 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 RPSAP39-201ENST00000467439 883 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 UBFD1P1-201ENST00000473259 814 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 RN7SL326P-201ENST00000477493 296 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AC026826.1-201ENST00000493002 361 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AC063943.2-201ENST00000495697 534 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AC114781.3-201ENST00000512083 142 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 RNU6-362P-201ENST00000516736 90 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 IGLV2-28-201ENST00000520681 304 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AC018690.1-201ENST00000608144 626 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AC108673.3-201ENST00000609183 335 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AC004948.1-201ENST00000609858 672 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AF117829.2-201ENST00000619538 361 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AL157762.1-201ENST00000619612 415 ntBASIC6.91□□□□□ -1.3
HERVK_113Q902F9 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERVK_113Q902F9 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms