Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 RNA5SP418-201ENST00000515951 117 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 RN7SL475P-201ENST00000583379 298 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AC027229.1-201ENST00000583887 253 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AL583832.1-201ENST00000603227 784 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AL390877.1-201ENST00000605704 214 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AL589743.6-201ENST00000611025 117 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AC003992.1-201ENST00000635364 557 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 ZNF37CP-201ENST00000406795 241 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 AL354766.1-201ENST00000423396 542 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 AL590399.2-201ENST00000427536 309 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 RN7SL552P-201ENST00000462094 276 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 AC063955.1-201ENST00000462872 685 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 RN7SL790P-201ENST00000474043 298 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 RN7SL267P-201ENST00000485107 261 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 NIFKP4-201ENST00000567275 1192 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 AC024267.2-201ENST00000582737 417 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 AC005332.4-201ENST00000592752 579 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 AC025857.2-201ENST00000602711 238 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 AL591222.2-201ENST00000604443 754 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 AC016590.3-201ENST00000611171 753 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 MIR6503-201ENST00000622884 86 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 CLUHP10-201ENST00000631979 980 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 OR7E91P-202ENST00000642062 1198 ntBASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC50Q8IVM0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 AL136984.1-201ENST00000607611 1893 ntBASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 GAPDHP37-201ENST00000442317 968 ntBASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 RN7SL369P-201ENST00000477138 299 ntBASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 AC131935.1-201ENST00000524621 333 ntBASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 AC090651.1-201ENST00000567865 634 ntBASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 AC068213.1-201ENST00000625124 226 ntBASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 AC119674.1-217ENST00000641942 1086 ntBASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 AC016745.2-201ENST00000608834 3443 ntBASIC6.53□□□□□ -1.36
CCDC50Q8IVM0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 247.9 ms