Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 RNA5SP346-201ENST00000363541 121 ntBASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 NPM1P38-201ENST00000403835 865 ntBASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 MIR1282-201ENST00000408865 101 ntBASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 RN7SKP121-201ENST00000410842 305 ntBASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 RPS7P14-201ENST00000426405 583 ntBASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 RPS10P18-201ENST00000442662 495 ntBASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 MORF4-201ENST00000447135 971 ntBASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 AL133351.3-201ENST00000454998 193 ntBASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 SNX18P24-201ENST00000505249 671 ntBASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 HSPD1P9-201ENST00000420325 1636 ntBASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 AC120036.2-201ENST00000509729 1474 ntBASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
H3F3CQ6NXT2 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 SNORA70.9-201ENST00000384370 135 ntBASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 AC110602.1-201ENST00000437414 318 ntBASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 HIGD1AP16-201ENST00000450986 258 ntBASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 AC144530.1-201ENST00000452862 555 ntBASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 RBBP4P1-201ENST00000502424 1276 ntBASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 LSM3P4-201ENST00000502948 309 ntBASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 LDHBP3-201ENST00000514909 822 ntBASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 DYNLL1P1-201ENST00000595442 269 ntBASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 AP001823.1-201ENST00000604056 1003 ntBASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 AC091167.5-201ENST00000605689 894 ntBASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 AL008723.3-201ENST00000608926 449 ntBASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 AC025262.3-201ENST00000623666 360 ntBASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
H3F3CQ6NXT2 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.81□□□□□ -1.48
H3F3CQ6NXT2 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms