Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FBXO38-202ENST00000340253 4424 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 TTC6-203ENST00000476979 2253 ntTSL 2 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 CDC25C-203ENST00000415130 1556 ntTSL 5 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 LINC00210-201ENST00000431637 1584 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 SNORA73A-201ENST00000364938 206 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 GPN2-201ENST00000374133 715 ntTSL 3 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 CST11-201ENST00000377007 461 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 Y_RNA.489-201ENST00000384410 101 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 U3.23-201ENST00000391132 200 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 MTND3P8-201ENST00000412909 339 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 MEMO1P4-201ENST00000453590 386 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 MTCO3P20-201ENST00000454926 688 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 RN7SL505P-201ENST00000482644 293 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 AC226119.2-201ENST00000513501 530 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 AC105417.1-201ENST00000514691 285 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 RN7SKP190-201ENST00000516079 286 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 SNORA81.2-201ENST00000516868 170 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 RNU6-255P-201ENST00000516957 105 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 IGHVII-22-1-201ENST00000517888 265 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 OR4C9P-201ENST00000532368 925 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 AC079031.2-201ENST00000537742 615 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 AC127029.1-201ENST00000560822 237 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 FRG2DP-202ENST00000566967 323 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 AP001004.1-201ENST00000582468 324 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 LINC00674-202ENST00000590734 160 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 uc_338.22-201ENST00000622722 187 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 NAA50-211ENST00000630058 177 ntTSL 5 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 AMPH-201ENST00000325590 3145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 CDHR3-211ENST00000478080 2633 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 NVL-202ENST00000340871 2431 ntTSL 2 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 NOS1-203ENST00000344089 4340 ntTSL 5 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 JAKMIP2-202ENST00000333010 2992 ntTSL 2 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 TRIM48-201ENST00000417545 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 OFD1P10Y-201ENST00000434110 1433 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 AC109315.1-201ENST00000584143 1347 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VARS2Q5ST30 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VARS2Q5ST30 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VARS2Q5ST30 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 ZNF233-201ENST00000391958 2784 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 FAM222B-201ENST00000341217 4033 ntTSL 5 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 LIMCH1-209ENST00000509277 3474 ntTSL 2 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VARS2Q5ST30 EIF3EP2-201ENST00000423042 1814 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 RPL21P132-201ENST00000331267 462 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 OR10R3P-201ENST00000361688 942 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 Y_RNA.197-201ENST00000364004 102 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 RPSAP42-201ENST00000403415 878 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 MORF4L1P1-201ENST00000404582 967 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC109780.2-201ENST00000413467 845 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 RPL6P29-201ENST00000414863 865 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC127526.2-201ENST00000426436 775 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 MTCO1P3-201ENST00000429327 192 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC007563.3-201ENST00000433233 371 ntBASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms