Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MTCO1P49-201ENST00000523429 802 ntBASIC6.83□□□□□ -1.32
YBX1P67809 OR4A2P-201ENST00000527276 913 ntBASIC6.83□□□□□ -1.32
YBX1P67809 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
YBX1P67809 SSU72P6-201ENST00000532644 488 ntBASIC6.83□□□□□ -1.32
YBX1P67809 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.83□□□□□ -1.32
YBX1P67809 MIR4800-201ENST00000537353 80 ntBASIC6.83□□□□□ -1.32
YBX1P67809 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.83□□□□□ -1.32
YBX1P67809 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
YBX1P67809 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.83□□□□□ -1.32
YBX1P67809 AC010546.1-201ENST00000569391 485 ntBASIC6.83□□□□□ -1.32
YBX1P67809 DPRXP4-201ENST00000578053 568 ntBASIC6.83□□□□□ -1.32
YBX1P67809 EIF4A3P1-201ENST00000578499 647 ntBASIC6.83□□□□□ -1.32
YBX1P67809 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.83□□□□□ -1.32
YBX1P67809 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.83□□□□□ -1.32
YBX1P67809 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.83□□□□□ -1.32
YBX1P67809 BNIP3P30-201ENST00000601184 574 ntBASIC6.83□□□□□ -1.32
YBX1P67809 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.83□□□□□ -1.32
YBX1P67809 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.83□□□□□ -1.32
YBX1P67809 AL031777.2-201ENST00000611953 196 ntBASIC6.83□□□□□ -1.32
YBX1P67809 AC019226.1-201ENST00000625666 515 ntBASIC6.83□□□□□ -1.32
YBX1P67809 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC6.83□□□□□ -1.32
YBX1P67809 AL596275.2-203ENST00000641951 371 ntBASIC6.83□□□□□ -1.32
YBX1P67809 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
YBX1P67809 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
YBX1P67809 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
YBX1P67809 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
YBX1P67809 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
YBX1P67809 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.83□□□□□ -1.32
YBX1P67809 AL590065.1-201ENST00000603371 4774 ntBASIC6.83□□□□□ -1.32
YBX1P67809 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
YBX1P67809 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
YBX1P67809 LINC01616-201ENST00000561816 2280 ntBASIC6.83□□□□□ -1.32
YBX1P67809 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
YBX1P67809 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
YBX1P67809 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 HYDIN2-203ENST00000614586 13885 ntBASIC6.82□□□□□ -1.32
YBX1P67809 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.82□□□□□ -1.32
YBX1P67809 AC005034.3-201ENST00000604845 1747 ntBASIC6.82□□□□□ -1.32
YBX1P67809 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.82□□□□□ -1.32
YBX1P67809 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC6.82□□□□□ -1.32
YBX1P67809 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
YBX1P67809 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 RNU6-207P-201ENST00000384137 107 ntBASIC6.82□□□□□ -1.32
YBX1P67809 MIR152-201ENST00000385212 87 ntBASIC6.82□□□□□ -1.32
YBX1P67809 ZNF37CP-201ENST00000406795 241 ntBASIC6.82□□□□□ -1.32
YBX1P67809 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.82□□□□□ -1.32
YBX1P67809 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.82□□□□□ -1.32
YBX1P67809 MICG-208ENST00000416822 132 ntBASIC6.82□□□□□ -1.32
YBX1P67809 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.82□□□□□ -1.32
YBX1P67809 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.82□□□□□ -1.32
YBX1P67809 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.82□□□□□ -1.32
YBX1P67809 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.82□□□□□ -1.32
YBX1P67809 MTCYBP5-201ENST00000423752 1135 ntBASIC6.82□□□□□ -1.32
YBX1P67809 C8orf59P1-201ENST00000429930 303 ntBASIC6.82□□□□□ -1.32
YBX1P67809 RPS26P4-201ENST00000431743 355 ntBASIC6.82□□□□□ -1.32
YBX1P67809 CHCHD4P5-201ENST00000436684 427 ntBASIC6.82□□□□□ -1.32
YBX1P67809 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.82□□□□□ -1.32
YBX1P67809 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.82□□□□□ -1.32
YBX1P67809 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.82□□□□□ -1.32
YBX1P67809 MTND2P14-201ENST00000482139 351 ntBASIC6.82□□□□□ -1.32
YBX1P67809 RPL7AP30-201ENST00000482859 796 ntBASIC6.82□□□□□ -1.32
YBX1P67809 RPL10P7-201ENST00000495649 625 ntBASIC6.82□□□□□ -1.32
YBX1P67809 AC105391.1-201ENST00000503155 1045 ntBASIC6.82□□□□□ -1.32
YBX1P67809 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.82□□□□□ -1.32
YBX1P67809 MTND5P13-201ENST00000513046 1079 ntBASIC6.82□□□□□ -1.32
YBX1P67809 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.82□□□□□ -1.32
YBX1P67809 HMGB1P1-201ENST00000522557 636 ntBASIC6.82□□□□□ -1.32
YBX1P67809 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.82□□□□□ -1.32
YBX1P67809 OR4A17P-201ENST00000526032 904 ntBASIC6.82□□□□□ -1.32
YBX1P67809 MTCO2P15-201ENST00000532655 656 ntBASIC6.82□□□□□ -1.32
YBX1P67809 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 CYB5AP5-201ENST00000549779 389 ntBASIC6.82□□□□□ -1.32
YBX1P67809 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.82□□□□□ -1.32
YBX1P67809 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.82□□□□□ -1.32
YBX1P67809 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.82□□□□□ -1.32
YBX1P67809 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 AC069542.2-201ENST00000624816 216 ntBASIC6.82□□□□□ -1.32
YBX1P67809 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
YBX1P67809 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.82□□□□□ -1.32
YBX1P67809 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.82□□□□□ -1.32
YBX1P67809 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.82□□□□□ -1.32
YBX1P67809 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
YBX1P67809 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.82□□□□□ -1.32
YBX1P67809 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.82□□□□□ -1.32
YBX1P67809 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.82□□□□□ -1.32
YBX1P67809 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
YBX1P67809 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms