Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC004232.2-201ENST00000574245 821 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A1P61619 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A1P61619 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AC098483.2-201ENST00000603158 454 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AC022387.2-201ENST00000604050 448 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AL390877.1-201ENST00000605704 214 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AL512506.1-201ENST00000613918 449 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AC005393.1-201ENST00000617916 584 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AC005514.1-201ENST00000623521 208 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AC061999.1-201ENST00000624454 177 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AC022919.1-201ENST00000624979 626 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 SNORA16A-202ENST00000628458 135 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AC007603.3-201ENST00000636915 979 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AC079753.1-201ENST00000623243 3868 ntBASIC5.65□□□□□ -1.51
SEC61A1P61619 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SEC61A1P61619 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.65□□□□□ -1.51
SEC61A1P61619 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SEC61A1P61619 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.65□□□□□ -1.51
SEC61A1P61619 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SEC61A1P61619 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SEC61A1P61619 AC110373.1-201ENST00000505994 3505 ntBASIC5.65□□□□□ -1.51
SEC61A1P61619 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
SEC61A1P61619 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A1P61619 AL592429.1-201ENST00000403909 1473 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A1P61619 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A1P61619 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SEC61A1P61619 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A1P61619 AL449283.1-201ENST00000602631 3403 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A1P61619 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A1P61619 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SEC61A1P61619 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A1P61619 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.64□□□□□ -1.51
SEC61A1P61619 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SEC61A1P61619 RNA5SP350-201ENST00000363298 111 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 RNU11-201ENST00000387069 134 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 FDPSP5-201ENST00000399474 1057 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 AL050305.1-201ENST00000399993 1230 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 RPL12P23-201ENST00000405880 490 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 RNA5SP155-201ENST00000411154 129 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 AC073310.1-201ENST00000423226 1033 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 GAPDHP57-201ENST00000424400 585 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 VN1R53P-201ENST00000429536 957 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.64□□□□□ -1.51
SEC61A1P61619 ZFAND6P1-201ENST00000434138 605 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 AC092601.1-201ENST00000444526 383 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.64□□□□□ -1.51
SEC61A1P61619 RN7SL83P-201ENST00000468131 297 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 SLC25A51P1-201ENST00000468432 871 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 AC092824.1-201ENST00000483524 576 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.64□□□□□ -1.51
SEC61A1P61619 AC083906.1-201ENST00000509298 406 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.64□□□□□ -1.51
SEC61A1P61619 IGHV3-57-201ENST00000520143 280 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 SNRPCP6-201ENST00000528310 210 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A1P61619 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SEC61A1P61619 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SEC61A1P61619 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.64□□□□□ -1.51
SEC61A1P61619 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.64□□□□□ -1.51
SEC61A1P61619 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A1P61619 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.64□□□□□ -1.51
SEC61A1P61619 RN7SL270P-201ENST00000579643 281 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 AC126365.2-201ENST00000580630 379 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.64□□□□□ -1.51
SEC61A1P61619 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.64□□□□□ -1.51
SEC61A1P61619 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.64□□□□□ -1.51
SEC61A1P61619 AL360012.1-201ENST00000602813 131 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 DIMT1P1-201ENST00000603970 763 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.64□□□□□ -1.51
SEC61A1P61619 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.64□□□□□ -1.51
SEC61A1P61619 AL008582.1-201ENST00000609612 442 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.64□□□□□ -1.51
SEC61A1P61619 AC008833.1-201ENST00000611633 691 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 AC015819.1-201ENST00000613588 663 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 AC008147.4-201ENST00000617570 1204 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 AC012653.2-201ENST00000621880 420 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.64□□□□□ -1.51
SEC61A1P61619 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.64□□□□□ -1.51
SEC61A1P61619 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.64□□□□□ -1.51
SEC61A1P61619 AC022613.3-201ENST00000560740 1346 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A1P61619 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A1P61619 MTND4P21-201ENST00000453886 1357 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 CASC19-255ENST00000641733 1385 ntBASIC5.64□□□□□ -1.51
SEC61A1P61619 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A1P61619 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A1P61619 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A1P61619 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms