Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.14□□□□□ -1.43
PDX1P52945 AC098799.1-201ENST00000504752 800 ntBASIC6.14□□□□□ -1.43
PDX1P52945 AL158068.1-201ENST00000506116 616 ntBASIC6.14□□□□□ -1.43
PDX1P52945 OR4D12P-201ENST00000509361 911 ntBASIC6.14□□□□□ -1.43
PDX1P52945 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.14□□□□□ -1.43
PDX1P52945 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PDX1P52945 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.14□□□□□ -1.43
PDX1P52945 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC6.14□□□□□ -1.43
PDX1P52945 MRPS21P9-201ENST00000571150 257 ntBASIC6.14□□□□□ -1.43
PDX1P52945 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.14□□□□□ -1.43
PDX1P52945 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.14□□□□□ -1.43
PDX1P52945 AC067852.5-201ENST00000589299 310 ntBASIC6.14□□□□□ -1.43
PDX1P52945 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.14□□□□□ -1.43
PDX1P52945 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.14□□□□□ -1.43
PDX1P52945 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.14□□□□□ -1.43
PDX1P52945 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.14□□□□□ -1.43
PDX1P52945 AC004801.6-201ENST00000616571 978 ntBASIC6.14□□□□□ -1.43
PDX1P52945 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.14□□□□□ -1.43
PDX1P52945 OR7E91P-202ENST00000642062 1198 ntBASIC6.14□□□□□ -1.43
PDX1P52945 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
PDX1P52945 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.14□□□□□ -1.43
PDX1P52945 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.14□□□□□ -1.43
PDX1P52945 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
PDX1P52945 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.14□□□□□ -1.43
PDX1P52945 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.14□□□□□ -1.43
PDX1P52945 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.14□□□□□ -1.43
PDX1P52945 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.14□□□□□ -1.43
PDX1P52945 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PDX1P52945 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDX1P52945 AL669831.5-218ENST00000591702 1873 ntBASIC6.13□□□□□ -1.43
PDX1P52945 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDX1P52945 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDX1P52945 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PDX1P52945 PARP4P1-201ENST00000435945 2337 ntBASIC6.13□□□□□ -1.43
PDX1P52945 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDX1P52945 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PDX1P52945 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDX1P52945 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.13□□□□□ -1.43
PDX1P52945 MIR130B-202ENST00000385018 82 ntBASIC6.13□□□□□ -1.43
PDX1P52945 RPS20P25-201ENST00000412447 352 ntBASIC6.13□□□□□ -1.43
PDX1P52945 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.13□□□□□ -1.43
PDX1P52945 AC244033.1-201ENST00000426826 870 ntBASIC6.13□□□□□ -1.43
PDX1P52945 AC104843.2-201ENST00000427666 297 ntBASIC6.13□□□□□ -1.43
PDX1P52945 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.13□□□□□ -1.43
PDX1P52945 RPL6P30-201ENST00000443382 862 ntBASIC6.13□□□□□ -1.43
PDX1P52945 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.13□□□□□ -1.43
PDX1P52945 AL133351.3-201ENST00000454998 193 ntBASIC6.13□□□□□ -1.43
PDX1P52945 RPL5P16-201ENST00000471467 790 ntBASIC6.13□□□□□ -1.43
PDX1P52945 RN7SL643P-201ENST00000471845 291 ntBASIC6.13□□□□□ -1.43
PDX1P52945 RN7SL101P-201ENST00000496350 279 ntBASIC6.13□□□□□ -1.43
PDX1P52945 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.13□□□□□ -1.43
PDX1P52945 AC006499.4-201ENST00000510947 694 ntBASIC6.13□□□□□ -1.43
PDX1P52945 RNU6-964P-201ENST00000516524 69 ntBASIC6.13□□□□□ -1.43
PDX1P52945 AC060775.1-201ENST00000518241 520 ntBASIC6.13□□□□□ -1.43
PDX1P52945 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.13□□□□□ -1.43
PDX1P52945 IGHV4-55-201ENST00000520889 368 ntBASIC6.13□□□□□ -1.43
PDX1P52945 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.13□□□□□ -1.43
PDX1P52945 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.13□□□□□ -1.43
PDX1P52945 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.13□□□□□ -1.43
PDX1P52945 DPPA3P2-201ENST00000553589 478 ntBASIC6.13□□□□□ -1.43
PDX1P52945 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.13□□□□□ -1.43
PDX1P52945 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.13□□□□□ -1.43
PDX1P52945 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.13□□□□□ -1.43
PDX1P52945 PRELID3BP3-201ENST00000584963 545 ntBASIC6.13□□□□□ -1.43
PDX1P52945 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDX1P52945 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.13□□□□□ -1.43
PDX1P52945 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.13□□□□□ -1.43
PDX1P52945 FAM27E2-201ENST00000619668 403 ntBASIC6.13□□□□□ -1.43
PDX1P52945 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.13□□□□□ -1.43
PDX1P52945 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDX1P52945 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.13□□□□□ -1.43
PDX1P52945 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.13□□□□□ -1.43
PDX1P52945 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.13□□□□□ -1.43
PDX1P52945 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.13□□□□□ -1.43
PDX1P52945 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.13□□□□□ -1.43
PDX1P52945 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
PDX1P52945 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDX1P52945 AC005332.9-201ENST00000620266 2921 ntBASIC6.13□□□□□ -1.43
PDX1P52945 AC018717.1-201ENST00000457712 1505 ntBASIC6.13□□□□□ -1.43
PDX1P52945 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDX1P52945 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDX1P52945 HSPD1P9-201ENST00000420325 1636 ntBASIC6.13□□□□□ -1.43
PDX1P52945 AC093829.1-201ENST00000506662 1618 ntBASIC6.13□□□□□ -1.43
PDX1P52945 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
PDX1P52945 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PDX1P52945 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDX1P52945 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDX1P52945 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDX1P52945 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 367.8 ms