Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RPS7P8-201ENST00000418311 581 ntBASIC6.81□□□□□ -1.32
CLCN3P51790 RPS3P2-201ENST00000421346 701 ntBASIC6.81□□□□□ -1.32
CLCN3P51790 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.81□□□□□ -1.32
CLCN3P51790 AC009237.1-201ENST00000442127 744 ntBASIC6.81□□□□□ -1.32
CLCN3P51790 AC011742.2-201ENST00000443818 352 ntBASIC6.81□□□□□ -1.32
CLCN3P51790 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.81□□□□□ -1.32
CLCN3P51790 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CLCN3P51790 UGT2A3P7-201ENST00000510485 734 ntBASIC6.81□□□□□ -1.32
CLCN3P51790 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.81□□□□□ -1.32
CLCN3P51790 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CLCN3P51790 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.81□□□□□ -1.32
CLCN3P51790 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.81□□□□□ -1.32
CLCN3P51790 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CLCN3P51790 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.81□□□□□ -1.32
CLCN3P51790 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.81□□□□□ -1.32
CLCN3P51790 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.81□□□□□ -1.32
CLCN3P51790 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.81□□□□□ -1.32
CLCN3P51790 MIR3189-201ENST00000578735 73 ntBASIC6.81□□□□□ -1.32
CLCN3P51790 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.81□□□□□ -1.32
CLCN3P51790 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.81□□□□□ -1.32
CLCN3P51790 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CLCN3P51790 OR7A8P-201ENST00000595427 913 ntBASIC6.81□□□□□ -1.32
CLCN3P51790 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CLCN3P51790 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.81□□□□□ -1.32
CLCN3P51790 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.81□□□□□ -1.32
CLCN3P51790 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.81□□□□□ -1.32
CLCN3P51790 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CLCN3P51790 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CLCN3P51790 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CLCN3P51790 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CLCN3P51790 CASC19-238ENST00000641523 1558 ntBASIC6.81□□□□□ -1.32
CLCN3P51790 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CLCN3P51790 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CLCN3P51790 MTCO1P28-201ENST00000574177 1528 ntBASIC6.81□□□□□ -1.32
CLCN3P51790 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CLCN3P51790 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 AL731556.1-201ENST00000394628 3711 ntBASIC6.8□□□□□ -1.32
CLCN3P51790 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CLCN3P51790 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.8□□□□□ -1.32
CLCN3P51790 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.8□□□□□ -1.32
CLCN3P51790 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
CLCN3P51790 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.8□□□□□ -1.32
CLCN3P51790 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 RNFT1P3-201ENST00000340898 1052 ntBASIC6.8□□□□□ -1.32
CLCN3P51790 RNA5SP273-201ENST00000362484 113 ntBASIC6.8□□□□□ -1.32
CLCN3P51790 RNA5SP477-201ENST00000362639 119 ntBASIC6.8□□□□□ -1.32
CLCN3P51790 RN7SKP269-201ENST00000365545 319 ntBASIC6.8□□□□□ -1.32
CLCN3P51790 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
CLCN3P51790 SUGT1P2-201ENST00000379452 992 ntBASIC6.8□□□□□ -1.32
CLCN3P51790 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.8□□□□□ -1.32
CLCN3P51790 RPL35AP31-201ENST00000418340 337 ntBASIC6.8□□□□□ -1.32
CLCN3P51790 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.8□□□□□ -1.32
CLCN3P51790 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.8□□□□□ -1.32
CLCN3P51790 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.8□□□□□ -1.32
CLCN3P51790 MTCO3P17-201ENST00000443775 513 ntBASIC6.8□□□□□ -1.32
CLCN3P51790 ZNF619P1-201ENST00000446539 752 ntBASIC6.8□□□□□ -1.32
CLCN3P51790 FTLP8-201ENST00000446770 267 ntBASIC6.8□□□□□ -1.32
CLCN3P51790 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.8□□□□□ -1.32
CLCN3P51790 RN7SKP98-201ENST00000517070 156 ntBASIC6.8□□□□□ -1.32
CLCN3P51790 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.8□□□□□ -1.32
CLCN3P51790 IGHV1-14-201ENST00000523391 241 ntBASIC6.8□□□□□ -1.32
CLCN3P51790 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.8□□□□□ -1.32
CLCN3P51790 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.8□□□□□ -1.32
CLCN3P51790 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.8□□□□□ -1.32
CLCN3P51790 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 AC007956.1-201ENST00000555623 542 ntBASIC6.8□□□□□ -1.32
CLCN3P51790 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.8□□□□□ -1.32
CLCN3P51790 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.8□□□□□ -1.32
CLCN3P51790 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.8□□□□□ -1.32
CLCN3P51790 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.8□□□□□ -1.32
CLCN3P51790 AC119674.1-202ENST00000641333 1860 ntBASIC6.8□□□□□ -1.32
CLCN3P51790 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.8□□□□□ -1.32
CLCN3P51790 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLCN3P51790 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.8□□□□□ -1.32
CLCN3P51790 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CLCN3P51790 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CLCN3P51790 AL033543.1-201ENST00000623440 13454 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CLCN3P51790 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
CLCN3P51790 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
CLCN3P51790 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
CLCN3P51790 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.79□□□□□ -1.32
CLCN3P51790 AC091305.2-201ENST00000624049 1576 ntBASIC6.79□□□□□ -1.32
CLCN3P51790 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CLCN3P51790 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLCN3P51790 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CLCN3P51790 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms