Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.2□□□□□ -1.42
HNF4AP41235 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HNF4AP41235 AC023968.1-201ENST00000560719 475 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.2□□□□□ -1.42
HNF4AP41235 LINC00556-201ENST00000569603 412 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 AP001542.1-201ENST00000591314 200 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.2□□□□□ -1.42
HNF4AP41235 AC125494.2-201ENST00000602431 657 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.2□□□□□ -1.42
HNF4AP41235 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.2□□□□□ -1.42
HNF4AP41235 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.2□□□□□ -1.42
HNF4AP41235 AL352984.2-202ENST00000613699 155 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HNF4AP41235 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.2□□□□□ -1.42
HNF4AP41235 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.2□□□□□ -1.42
HNF4AP41235 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HNF4AP41235 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HNF4AP41235 AC006511.3-201ENST00000624929 1783 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.2□□□□□ -1.42
HNF4AP41235 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HNF4AP41235 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HNF4AP41235 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HNF4AP41235 MTND5P23-201ENST00000430812 1655 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.2□□□□□ -1.42
HNF4AP41235 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.2□□□□□ -1.42
HNF4AP41235 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.2□□□□□ -1.42
HNF4AP41235 AC110373.1-201ENST00000505994 3505 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HNF4AP41235 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.19□□□□□ -1.42
HNF4AP41235 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HNF4AP41235 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HNF4AP41235 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HNF4AP41235 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.19□□□□□ -1.42
HNF4AP41235 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
HNF4AP41235 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HNF4AP41235 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HNF4AP41235 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HNF4AP41235 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HNF4AP41235 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HNF4AP41235 SNORD16-201ENST00000362803 99 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 RNA5SP478-201ENST00000364657 115 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HNF4AP41235 RN7SKP161-201ENST00000411110 305 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 VN1R31P-201ENST00000417498 730 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 AC007568.1-201ENST00000422912 471 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.19□□□□□ -1.42
HNF4AP41235 AL645939.3-201ENST00000435408 225 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.19□□□□□ -1.42
HNF4AP41235 RPL12P49-201ENST00000441100 121 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.19□□□□□ -1.42
HNF4AP41235 AC128716.1-201ENST00000475129 166 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
HNF4AP41235 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.19□□□□□ -1.42
HNF4AP41235 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HNF4AP41235 LDHAP1-201ENST00000509421 992 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.19□□□□□ -1.42
HNF4AP41235 AC021146.10-201ENST00000515628 706 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.19□□□□□ -1.42
HNF4AP41235 COX6B1P4-201ENST00000519826 484 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.19□□□□□ -1.42
HNF4AP41235 AL121579.2-201ENST00000555466 590 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 AC037479.1-201ENST00000558361 625 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 AC005479.3-201ENST00000602790 431 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 AC024589.2-201ENST00000605642 1294 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 AP005212.4-201ENST00000614206 710 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 MIR6813-201ENST00000621638 56 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.19□□□□□ -1.42
HNF4AP41235 LINC02495-203ENST00000636704 242 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.19□□□□□ -1.42
HNF4AP41235 IMMTP1-201ENST00000435590 2219 ntBASIC6.19□□□□□ -1.42
HNF4AP41235 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HNF4AP41235 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HNF4AP41235 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HNF4AP41235 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HNF4AP41235 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.18□□□□□ -1.42
HNF4AP41235 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.18□□□□□ -1.42
HNF4AP41235 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
HNF4AP41235 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 SNORD35A-201ENST00000363389 86 ntBASIC6.18□□□□□ -1.42
HNF4AP41235 RNU1-84P-201ENST00000365447 164 ntBASIC6.18□□□□□ -1.42
HNF4AP41235 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.18□□□□□ -1.42
HNF4AP41235 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.18□□□□□ -1.42
HNF4AP41235 AC083862.1-201ENST00000427378 1242 ntBASIC6.18□□□□□ -1.42
HNF4AP41235 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HNF4AP41235 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.18□□□□□ -1.42
HNF4AP41235 AC009237.1-201ENST00000442127 744 ntBASIC6.18□□□□□ -1.42
HNF4AP41235 AL356121.1-201ENST00000442911 156 ntBASIC6.18□□□□□ -1.42
HNF4AP41235 OR13K1P-201ENST00000444577 975 ntBASIC6.18□□□□□ -1.42
HNF4AP41235 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.18□□□□□ -1.42
HNF4AP41235 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.18□□□□□ -1.42
HNF4AP41235 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.18□□□□□ -1.42
HNF4AP41235 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.18□□□□□ -1.42
HNF4AP41235 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.18□□□□□ -1.42
HNF4AP41235 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 358.1 ms