Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SHMT2P34897 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SHMT2P34897 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHMT2P34897 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHMT2P34897 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.09□□□□□ -1.43
SHMT2P34897 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHMT2P34897 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.09□□□□□ -1.43
SHMT2P34897 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHMT2P34897 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
SHMT2P34897 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SHMT2P34897 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHMT2P34897 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHMT2P34897 AC005725.1-201ENST00000577346 2607 ntBASIC6.09□□□□□ -1.43
SHMT2P34897 RNA5SP346-201ENST00000363541 121 ntBASIC6.09□□□□□ -1.43
SHMT2P34897 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.09□□□□□ -1.43
SHMT2P34897 RN7SKP121-201ENST00000410842 305 ntBASIC6.09□□□□□ -1.43
SHMT2P34897 RN7SKP144-201ENST00000411108 279 ntBASIC6.09□□□□□ -1.43
SHMT2P34897 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.09□□□□□ -1.43
SHMT2P34897 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.09□□□□□ -1.43
SHMT2P34897 AC108479.1-201ENST00000431142 427 ntBASIC6.09□□□□□ -1.43
SHMT2P34897 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.09□□□□□ -1.43
SHMT2P34897 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.09□□□□□ -1.43
SHMT2P34897 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.09□□□□□ -1.43
SHMT2P34897 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.09□□□□□ -1.43
SHMT2P34897 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.09□□□□□ -1.43
SHMT2P34897 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.09□□□□□ -1.43
SHMT2P34897 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.09□□□□□ -1.43
SHMT2P34897 AC095052.1-201ENST00000509955 863 ntBASIC6.09□□□□□ -1.43
SHMT2P34897 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.09□□□□□ -1.43
SHMT2P34897 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.09□□□□□ -1.43
SHMT2P34897 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.09□□□□□ -1.43
SHMT2P34897 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.09□□□□□ -1.43
SHMT2P34897 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHMT2P34897 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.09□□□□□ -1.43
SHMT2P34897 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.09□□□□□ -1.43
SHMT2P34897 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.09□□□□□ -1.43
SHMT2P34897 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.09□□□□□ -1.43
SHMT2P34897 AC007494.1-201ENST00000562293 760 ntBASIC6.09□□□□□ -1.43
SHMT2P34897 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.09□□□□□ -1.43
SHMT2P34897 DYNLL1P1-201ENST00000595442 269 ntBASIC6.09□□□□□ -1.43
SHMT2P34897 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.09□□□□□ -1.43
SHMT2P34897 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.09□□□□□ -1.43
SHMT2P34897 AC024255.1-201ENST00000614376 102 ntBASIC6.09□□□□□ -1.43
SHMT2P34897 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.09□□□□□ -1.43
SHMT2P34897 MIR6721-201ENST00000617181 87 ntBASIC6.09□□□□□ -1.43
SHMT2P34897 AP001052.1-201ENST00000626421 99 ntBASIC6.09□□□□□ -1.43
SHMT2P34897 AL357140.4-201ENST00000636827 412 ntBASIC6.09□□□□□ -1.43
SHMT2P34897 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.09□□□□□ -1.43
SHMT2P34897 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHMT2P34897 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHMT2P34897 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SHMT2P34897 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
SHMT2P34897 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHMT2P34897 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.44
SHMT2P34897 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.09□□□□□ -1.44
SHMT2P34897 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SHMT2P34897 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SHMT2P34897 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SHMT2P34897 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHMT2P34897 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SHMT2P34897 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHMT2P34897 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHMT2P34897 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHMT2P34897 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
SHMT2P34897 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHMT2P34897 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHMT2P34897 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
SHMT2P34897 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHMT2P34897 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHMT2P34897 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.08□□□□□ -1.44
SHMT2P34897 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.08□□□□□ -1.44
SHMT2P34897 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHMT2P34897 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.08□□□□□ -1.44
SHMT2P34897 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SHMT2P34897 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.08□□□□□ -1.44
SHMT2P34897 RNA5SP279-201ENST00000365513 117 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 RN7SKP187-201ENST00000365536 330 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 MIR1275-201ENST00000408770 80 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHMT2P34897 AL354893.1-201ENST00000433735 348 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.08□□□□□ -1.44
SHMT2P34897 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 AL133351.3-201ENST00000454998 193 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 RANP2-201ENST00000456833 229 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 RN7SL168P-201ENST00000463821 279 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 MARK2P8-201ENST00000476069 952 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SHMT2P34897 AC018797.1-201ENST00000510791 255 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 RNA5SP400-201ENST00000517155 111 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 AC024405.1-201ENST00000532521 1042 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.08□□□□□ -1.44
SHMT2P34897 AC023310.2-201ENST00000553844 547 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.08□□□□□ -1.44
SHMT2P34897 AC002519.2-203ENST00000567043 837 ntBASIC6.08□□□□□ -1.44
SHMT2P34897 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.08□□□□□ -1.44
SHMT2P34897 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.08□□□□□ -1.44
SHMT2P34897 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.08□□□□□ -1.44
SHMT2P34897 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.08□□□□□ -1.44
SHMT2P34897 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.08□□□□□ -1.44
SHMT2P34897 AC006924.1-201ENST00000610750 559 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms