Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TM4SF1P30408 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TM4SF1P30408 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
TM4SF1P30408 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
TM4SF1P30408 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.59□□□□□ -1.2
TM4SF1P30408 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.2
TM4SF1P30408 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TM4SF1P30408 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TM4SF1P30408 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TM4SF1P30408 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TM4SF1P30408 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TM4SF1P30408 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.58□□□□□ -1.2
TM4SF1P30408 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
TM4SF1P30408 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.58□□□□□ -1.2
TM4SF1P30408 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
TM4SF1P30408 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.58□□□□□ -1.2
TM4SF1P30408 Z82209.2-201ENST00000623410 2012 ntBASIC7.58□□□□□ -1.2
TM4SF1P30408 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TM4SF1P30408 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TM4SF1P30408 RNU1-19P-201ENST00000363306 165 ntBASIC7.58□□□□□ -1.2
TM4SF1P30408 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.58□□□□□ -1.2
TM4SF1P30408 RNU6-171P-201ENST00000384354 107 ntBASIC7.58□□□□□ -1.2
TM4SF1P30408 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
TM4SF1P30408 AC016739.1-201ENST00000405359 345 ntBASIC7.58□□□□□ -1.2
TM4SF1P30408 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.58□□□□□ -1.2
TM4SF1P30408 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.58□□□□□ -1.2
TM4SF1P30408 AL596448.1-201ENST00000415024 392 ntBASIC7.58□□□□□ -1.2
TM4SF1P30408 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.58□□□□□ -1.2
TM4SF1P30408 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.58□□□□□ -1.2
TM4SF1P30408 CT45A11P-201ENST00000448043 1134 ntBASIC7.58□□□□□ -1.2
TM4SF1P30408 MGAT2P1-201ENST00000449718 797 ntBASIC7.58□□□□□ -1.2
TM4SF1P30408 RN7SL727P-201ENST00000482164 296 ntBASIC7.58□□□□□ -1.2
TM4SF1P30408 AC231760.1-201ENST00000498002 260 ntBASIC7.58□□□□□ -1.2
TM4SF1P30408 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.58□□□□□ -1.2
TM4SF1P30408 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.58□□□□□ -1.2
TM4SF1P30408 RPA2P3-201ENST00000533268 770 ntBASIC7.58□□□□□ -1.2
TM4SF1P30408 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.58□□□□□ -1.2
TM4SF1P30408 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.58□□□□□ -1.2
TM4SF1P30408 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.58□□□□□ -1.2
TM4SF1P30408 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.58□□□□□ -1.2
TM4SF1P30408 RN7SL544P-201ENST00000617232 284 ntBASIC7.58□□□□□ -1.2
TM4SF1P30408 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.58□□□□□ -1.2
TM4SF1P30408 RN7SL763P-201ENST00000620922 284 ntBASIC7.58□□□□□ -1.2
TM4SF1P30408 AC009950.2-201ENST00000636548 183 ntBASIC7.58□□□□□ -1.2
TM4SF1P30408 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
TM4SF1P30408 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
TM4SF1P30408 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TM4SF1P30408 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TM4SF1P30408 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TM4SF1P30408 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TM4SF1P30408 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.58□□□□□ -1.2
TM4SF1P30408 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TM4SF1P30408 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.58□□□□□ -1.2
TM4SF1P30408 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
TM4SF1P30408 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
TM4SF1P30408 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.58□□□□□ -1.2
TM4SF1P30408 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.57□□□□□ -1.2
TM4SF1P30408 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
TM4SF1P30408 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
TM4SF1P30408 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.57□□□□□ -1.2
TM4SF1P30408 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.57□□□□□ -1.2
TM4SF1P30408 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
TM4SF1P30408 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
TM4SF1P30408 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TM4SF1P30408 MIR433-201ENST00000384837 93 ntBASIC7.57□□□□□ -1.2
TM4SF1P30408 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC7.57□□□□□ -1.2
TM4SF1P30408 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.57□□□□□ -1.2
TM4SF1P30408 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.57□□□□□ -1.2
TM4SF1P30408 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.57□□□□□ -1.2
TM4SF1P30408 NPM1P22-201ENST00000427761 952 ntBASIC7.57□□□□□ -1.2
TM4SF1P30408 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.57□□□□□ -1.2
TM4SF1P30408 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
TM4SF1P30408 AC011225.1-201ENST00000457751 369 ntBASIC7.57□□□□□ -1.2
TM4SF1P30408 RN7SL610P-201ENST00000463845 291 ntBASIC7.57□□□□□ -1.2
TM4SF1P30408 PFN1P6-201ENST00000476786 399 ntBASIC7.57□□□□□ -1.2
TM4SF1P30408 RN7SL184P-201ENST00000488308 297 ntBASIC7.57□□□□□ -1.2
TM4SF1P30408 GAPDHP71-201ENST00000511530 1003 ntBASIC7.57□□□□□ -1.2
TM4SF1P30408 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.57□□□□□ -1.2
TM4SF1P30408 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.57□□□□□ -1.2
TM4SF1P30408 HMGN2P36-201ENST00000529541 409 ntBASIC7.57□□□□□ -1.2
TM4SF1P30408 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.57□□□□□ -1.2
TM4SF1P30408 FAM27E4-201ENST00000605259 342 ntBASIC7.57□□□□□ -1.2
TM4SF1P30408 AC007204.2-201ENST00000615022 616 ntBASIC7.57□□□□□ -1.2
TM4SF1P30408 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.57□□□□□ -1.2
TM4SF1P30408 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.57□□□□□ -1.2
TM4SF1P30408 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.57□□□□□ -1.2
TM4SF1P30408 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.57□□□□□ -1.2
TM4SF1P30408 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
TM4SF1P30408 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TM4SF1P30408 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.57□□□□□ -1.2
TM4SF1P30408 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.57□□□□□ -1.2
TM4SF1P30408 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.57□□□□□ -1.2
TM4SF1P30408 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
TM4SF1P30408 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
TM4SF1P30408 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.57□□□□□ -1.2
TM4SF1P30408 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TM4SF1P30408 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
TM4SF1P30408 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TM4SF1P30408 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.56□□□□□ -1.2
TM4SF1P30408 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms