Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 RPL3P13-201ENST00000550415 216 ntBASIC5.75□□□□□ -1.49
NCK1P16333 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.75□□□□□ -1.49
NCK1P16333 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.75□□□□□ -1.49
NCK1P16333 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.75□□□□□ -1.49
NCK1P16333 AL591167.1-201ENST00000607321 456 ntBASIC5.75□□□□□ -1.49
NCK1P16333 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.75□□□□□ -1.49
NCK1P16333 RN7SL261P-201ENST00000613441 282 ntBASIC5.75□□□□□ -1.49
NCK1P16333 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NCK1P16333 AP003108.4-201ENST00000623917 878 ntBASIC5.75□□□□□ -1.49
NCK1P16333 AP001153.1-201ENST00000641024 338 ntBASIC5.75□□□□□ -1.49
NCK1P16333 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NCK1P16333 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.75□□□□□ -1.49
NCK1P16333 SMG1P5-202ENST00000529428 4219 ntBASIC5.75□□□□□ -1.49
NCK1P16333 SMG1P2-201ENST00000566127 4221 ntBASIC5.75□□□□□ -1.49
NCK1P16333 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
NCK1P16333 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NCK1P16333 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NCK1P16333 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.75□□□□□ -1.49
NCK1P16333 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
NCK1P16333 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.75□□□□□ -1.49
NCK1P16333 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.75□□□□□ -1.49
NCK1P16333 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NCK1P16333 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NCK1P16333 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NCK1P16333 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NCK1P16333 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NCK1P16333 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
NCK1P16333 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.74□□□□□ -1.49
NCK1P16333 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.74□□□□□ -1.49
NCK1P16333 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NCK1P16333 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.74□□□□□ -1.49
NCK1P16333 AC005224.3-201ENST00000584683 2140 ntBASIC5.74□□□□□ -1.49
NCK1P16333 AC004076.2-201ENST00000620532 3323 ntBASIC5.74□□□□□ -1.49
NCK1P16333 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.74□□□□□ -1.49
NCK1P16333 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NCK1P16333 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NCK1P16333 AC019178.1-201ENST00000392337 440 ntBASIC5.74□□□□□ -1.49
NCK1P16333 AL353133.1-201ENST00000407695 401 ntBASIC5.74□□□□□ -1.49
NCK1P16333 RN7SKP121-201ENST00000410842 305 ntBASIC5.74□□□□□ -1.49
NCK1P16333 PTCD2P2-201ENST00000415579 1095 ntBASIC5.74□□□□□ -1.49
NCK1P16333 AL672212.1-201ENST00000422246 400 ntBASIC5.74□□□□□ -1.49
NCK1P16333 AC013403.1-201ENST00000436954 263 ntBASIC5.74□□□□□ -1.49
NCK1P16333 KRT8P51-201ENST00000438938 274 ntBASIC5.74□□□□□ -1.49
NCK1P16333 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.74□□□□□ -1.49
NCK1P16333 RN7SL284P-201ENST00000498823 275 ntBASIC5.74□□□□□ -1.49
NCK1P16333 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.74□□□□□ -1.49
NCK1P16333 Y_RNA.710-201ENST00000516975 110 ntBASIC5.74□□□□□ -1.49
NCK1P16333 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.74□□□□□ -1.49
NCK1P16333 AC136777.2-201ENST00000522979 358 ntBASIC5.74□□□□□ -1.49
NCK1P16333 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC5.74□□□□□ -1.49
NCK1P16333 AP001858.2-201ENST00000536213 601 ntBASIC5.74□□□□□ -1.49
NCK1P16333 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.74□□□□□ -1.49
NCK1P16333 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.74□□□□□ -1.49
NCK1P16333 FCGR1CP-201ENST00000579737 1127 ntBASIC5.74□□□□□ -1.49
NCK1P16333 AL031429.2-201ENST00000602605 649 ntBASIC5.74□□□□□ -1.49
NCK1P16333 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NCK1P16333 AL031658.2-201ENST00000616850 651 ntBASIC5.74□□□□□ -1.49
NCK1P16333 AC103564.3-201ENST00000621194 220 ntBASIC5.74□□□□□ -1.49
NCK1P16333 DLST-216ENST00000626051 252 ntTSL 5 BASIC5.74□□□□□ -1.49
NCK1P16333 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.74□□□□□ -1.49
NCK1P16333 AC006453.3-201ENST00000635891 377 ntBASIC5.74□□□□□ -1.49
NCK1P16333 AC132825.8-201ENST00000640783 297 ntBASIC5.74□□□□□ -1.49
NCK1P16333 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
NCK1P16333 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NCK1P16333 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.74□□□□□ -1.49
NCK1P16333 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NCK1P16333 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NCK1P16333 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NCK1P16333 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.74□□□□□ -1.49
NCK1P16333 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
NCK1P16333 AC004656.1-201ENST00000568479 4951 ntBASIC5.74□□□□□ -1.49
NCK1P16333 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NCK1P16333 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NCK1P16333 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NCK1P16333 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
NCK1P16333 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NCK1P16333 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
NCK1P16333 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.74□□□□□ -1.49
NCK1P16333 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
NCK1P16333 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NCK1P16333 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NCK1P16333 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NCK1P16333 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NCK1P16333 OR5M2P-202ENST00000641241 4242 ntBASIC5.73□□□□□ -1.49
NCK1P16333 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NCK1P16333 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NCK1P16333 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.73□□□□□ -1.49
NCK1P16333 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.73□□□□□ -1.49
NCK1P16333 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NCK1P16333 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NCK1P16333 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.73□□□□□ -1.49
NCK1P16333 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NCK1P16333 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NCK1P16333 AC016583.1-201ENST00000624221 2431 ntBASIC5.73□□□□□ -1.49
NCK1P16333 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.73□□□□□ -1.49
NCK1P16333 RNU1-49P-201ENST00000363468 159 ntBASIC5.73□□□□□ -1.49
NCK1P16333 U3.10-201ENST00000364459 214 ntBASIC5.73□□□□□ -1.49
NCK1P16333 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.73□□□□□ -1.49
NCK1P16333 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NCK1P16333 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms