Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 RPL23AP18-201ENST00000416139 468 ntBASIC6.53□□□□□ -1.36
KRT3P12035 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.53□□□□□ -1.36
KRT3P12035 BMP6P1-201ENST00000431230 679 ntBASIC6.53□□□□□ -1.36
KRT3P12035 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.53□□□□□ -1.36
KRT3P12035 GAPDHP23-201ENST00000444823 993 ntBASIC6.53□□□□□ -1.36
KRT3P12035 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.53□□□□□ -1.36
KRT3P12035 KF459542.1-201ENST00000450908 553 ntBASIC6.53□□□□□ -1.36
KRT3P12035 SNX18P24-201ENST00000505249 671 ntBASIC6.53□□□□□ -1.36
KRT3P12035 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.53□□□□□ -1.36
KRT3P12035 SNORA81.2-201ENST00000516868 170 ntBASIC6.53□□□□□ -1.36
KRT3P12035 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.53□□□□□ -1.36
KRT3P12035 OR5D2P-201ENST00000524390 911 ntBASIC6.53□□□□□ -1.36
KRT3P12035 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
KRT3P12035 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.53□□□□□ -1.36
KRT3P12035 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.53□□□□□ -1.36
KRT3P12035 DPPA3P2-202ENST00000557188 1219 ntBASIC6.53□□□□□ -1.36
KRT3P12035 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.53□□□□□ -1.36
KRT3P12035 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.53□□□□□ -1.36
KRT3P12035 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.53□□□□□ -1.36
KRT3P12035 AC015819.1-201ENST00000613588 663 ntBASIC6.53□□□□□ -1.36
KRT3P12035 OR7A1P-202ENST00000641542 1158 ntBASIC6.53□□□□□ -1.36
KRT3P12035 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
KRT3P12035 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRT3P12035 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
KRT3P12035 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRT3P12035 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRT3P12035 AL359091.1-201ENST00000449048 1734 ntBASIC6.53□□□□□ -1.36
KRT3P12035 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRT3P12035 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
KRT3P12035 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRT3P12035 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
KRT3P12035 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
KRT3P12035 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.52□□□□□ -1.36
KRT3P12035 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRT3P12035 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
KRT3P12035 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.52□□□□□ -1.37
KRT3P12035 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.52□□□□□ -1.37
KRT3P12035 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.52□□□□□ -1.37
KRT3P12035 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRT3P12035 RN7SKP151-201ENST00000410230 316 ntBASIC6.52□□□□□ -1.37
KRT3P12035 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.52□□□□□ -1.37
KRT3P12035 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.52□□□□□ -1.37
KRT3P12035 VN1R20P-201ENST00000425215 966 ntBASIC6.52□□□□□ -1.37
KRT3P12035 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.52□□□□□ -1.37
KRT3P12035 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
KRT3P12035 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.52□□□□□ -1.37
KRT3P12035 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.52□□□□□ -1.37
KRT3P12035 HIGD1AP16-201ENST00000450986 258 ntBASIC6.52□□□□□ -1.37
KRT3P12035 RPL7L1P3-201ENST00000455249 689 ntBASIC6.52□□□□□ -1.37
KRT3P12035 H3F3AP5-201ENST00000475267 429 ntBASIC6.52□□□□□ -1.37
KRT3P12035 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.52□□□□□ -1.37
KRT3P12035 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRT3P12035 HMGN1P16-201ENST00000508308 283 ntBASIC6.52□□□□□ -1.37
KRT3P12035 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRT3P12035 Y_RNA.710-201ENST00000516975 110 ntBASIC6.52□□□□□ -1.37
KRT3P12035 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.52□□□□□ -1.37
KRT3P12035 OR6M2P-201ENST00000529831 871 ntBASIC6.52□□□□□ -1.37
KRT3P12035 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.52□□□□□ -1.37
KRT3P12035 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.52□□□□□ -1.37
KRT3P12035 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.52□□□□□ -1.37
KRT3P12035 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.52□□□□□ -1.37
KRT3P12035 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.52□□□□□ -1.37
KRT3P12035 AC090651.1-201ENST00000567865 634 ntBASIC6.52□□□□□ -1.37
KRT3P12035 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.52□□□□□ -1.37
KRT3P12035 WBP1LP12-201ENST00000604449 331 ntBASIC6.52□□□□□ -1.37
KRT3P12035 AL049840.6-201ENST00000604583 345 ntBASIC6.52□□□□□ -1.37
KRT3P12035 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.52□□□□□ -1.37
KRT3P12035 AL591167.1-201ENST00000607321 456 ntBASIC6.52□□□□□ -1.37
KRT3P12035 AC016252.1-201ENST00000609721 474 ntBASIC6.52□□□□□ -1.37
KRT3P12035 AC012676.3-201ENST00000614983 479 ntBASIC6.52□□□□□ -1.37
KRT3P12035 HTR1DP1-201ENST00000616500 888 ntBASIC6.52□□□□□ -1.37
KRT3P12035 AC010325.3-201ENST00000641084 394 ntBASIC6.52□□□□□ -1.37
KRT3P12035 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRT3P12035 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.52□□□□□ -1.37
KRT3P12035 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRT3P12035 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRT3P12035 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRT3P12035 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRT3P12035 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRT3P12035 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRT3P12035 HSPD1P8-201ENST00000400121 1658 ntBASIC6.52□□□□□ -1.37
KRT3P12035 MAPK10-261ENST00000641050 3109 ntBASIC6.52□□□□□ -1.37
KRT3P12035 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRT3P12035 AL731532.1-201ENST00000623972 4236 ntBASIC6.52□□□□□ -1.37
KRT3P12035 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.52□□□□□ -1.37
KRT3P12035 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRT3P12035 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRT3P12035 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.51□□□□□ -1.37
KRT3P12035 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
KRT3P12035 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
KRT3P12035 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.51□□□□□ -1.37
KRT3P12035 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRT3P12035 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRT3P12035 RNA5SP514-201ENST00000363717 111 ntBASIC6.51□□□□□ -1.37
KRT3P12035 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.51□□□□□ -1.37
KRT3P12035 RN7SKP146-201ENST00000410242 334 ntBASIC6.51□□□□□ -1.37
KRT3P12035 RNA5SP251-201ENST00000410614 137 ntBASIC6.51□□□□□ -1.37
KRT3P12035 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.51□□□□□ -1.37
KRT3P12035 AL645936.1-201ENST00000441979 518 ntBASIC6.51□□□□□ -1.37
KRT3P12035 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms