Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.03□□□□□ -1.28
HOXC6P09630 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.03□□□□□ -1.28
HOXC6P09630 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HOXC6P09630 AC084337.1-201ENST00000524809 686 ntBASIC7.03□□□□□ -1.28
HOXC6P09630 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.03□□□□□ -1.28
HOXC6P09630 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.03□□□□□ -1.28
HOXC6P09630 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.03□□□□□ -1.28
HOXC6P09630 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.03□□□□□ -1.28
HOXC6P09630 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.03□□□□□ -1.28
HOXC6P09630 AC007225.2-201ENST00000562529 256 ntBASIC7.03□□□□□ -1.28
HOXC6P09630 MIR3908-201ENST00000579798 126 ntBASIC7.03□□□□□ -1.28
HOXC6P09630 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.03□□□□□ -1.28
HOXC6P09630 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC7.03□□□□□ -1.28
HOXC6P09630 AL136131.3-201ENST00000607600 188 ntBASIC7.03□□□□□ -1.28
HOXC6P09630 MIR6826-201ENST00000617808 98 ntBASIC7.03□□□□□ -1.28
HOXC6P09630 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC7.03□□□□□ -1.28
HOXC6P09630 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.03□□□□□ -1.28
HOXC6P09630 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HOXC6P09630 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HOXC6P09630 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HOXC6P09630 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HOXC6P09630 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HOXC6P09630 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.03□□□□□ -1.28
HOXC6P09630 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HOXC6P09630 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.03□□□□□ -1.28
HOXC6P09630 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HOXC6P09630 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HOXC6P09630 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
HOXC6P09630 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HOXC6P09630 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
HOXC6P09630 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.28
HOXC6P09630 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.02□□□□□ -1.29
HOXC6P09630 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.02□□□□□ -1.29
HOXC6P09630 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 SHQ1P1-201ENST00000437111 1544 ntBASIC7.02□□□□□ -1.29
HOXC6P09630 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
HOXC6P09630 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
HOXC6P09630 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.02□□□□□ -1.29
HOXC6P09630 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
HOXC6P09630 AC105235.1-201ENST00000623208 1816 ntBASIC7.02□□□□□ -1.29
HOXC6P09630 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HOXC6P09630 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
HOXC6P09630 RPS20P25-201ENST00000412447 352 ntBASIC7.02□□□□□ -1.29
HOXC6P09630 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.02□□□□□ -1.29
HOXC6P09630 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.02□□□□□ -1.29
HOXC6P09630 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.02□□□□□ -1.29
HOXC6P09630 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.02□□□□□ -1.29
HOXC6P09630 RPSAP39-201ENST00000467439 883 ntBASIC7.02□□□□□ -1.29
HOXC6P09630 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 AC092824.1-201ENST00000483524 576 ntBASIC7.02□□□□□ -1.29
HOXC6P09630 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.02□□□□□ -1.29
HOXC6P09630 SETP21-201ENST00000514799 892 ntBASIC7.02□□□□□ -1.29
HOXC6P09630 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.02□□□□□ -1.29
HOXC6P09630 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.02□□□□□ -1.29
HOXC6P09630 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.02□□□□□ -1.29
HOXC6P09630 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.02□□□□□ -1.29
HOXC6P09630 AC097467.4-201ENST00000605504 141 ntBASIC7.02□□□□□ -1.29
HOXC6P09630 RN7SL787P-201ENST00000613000 284 ntBASIC7.02□□□□□ -1.29
HOXC6P09630 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.02□□□□□ -1.29
HOXC6P09630 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.02□□□□□ -1.29
HOXC6P09630 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
HOXC6P09630 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
HOXC6P09630 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.02□□□□□ -1.29
HOXC6P09630 AC005332.9-201ENST00000620266 2921 ntBASIC7.02□□□□□ -1.29
HOXC6P09630 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.02□□□□□ -1.29
HOXC6P09630 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HOXC6P09630 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HOXC6P09630 AC106872.5-201ENST00000508856 1416 ntBASIC7.01□□□□□ -1.29
HOXC6P09630 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.01□□□□□ -1.29
HOXC6P09630 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HOXC6P09630 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HOXC6P09630 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HOXC6P09630 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.01□□□□□ -1.29
HOXC6P09630 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
HOXC6P09630 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HOXC6P09630 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
HOXC6P09630 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
HOXC6P09630 AC009948.3-201ENST00000603415 1798 ntBASIC7.01□□□□□ -1.29
HOXC6P09630 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
HOXC6P09630 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HOXC6P09630 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.01□□□□□ -1.29
HOXC6P09630 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HOXC6P09630 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms