Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC016027.5-201ENST00000427227 210 ntBASIC6.36□□□□□ -1.39
CD48P09326 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.36□□□□□ -1.39
CD48P09326 AL445687.2-201ENST00000458156 728 ntBASIC6.36□□□□□ -1.39
CD48P09326 AL355032.1-201ENST00000472981 438 ntBASIC6.36□□□□□ -1.39
CD48P09326 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.36□□□□□ -1.39
CD48P09326 RPL29P23-201ENST00000486188 442 ntBASIC6.36□□□□□ -1.39
CD48P09326 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.36□□□□□ -1.39
CD48P09326 HMGN1P17-201ENST00000513734 295 ntBASIC6.36□□□□□ -1.39
CD48P09326 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD48P09326 RNA5SP434-201ENST00000516647 121 ntBASIC6.36□□□□□ -1.39
CD48P09326 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CD48P09326 BTG1P1-201ENST00000540396 508 ntBASIC6.36□□□□□ -1.39
CD48P09326 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.36□□□□□ -1.39
CD48P09326 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.36□□□□□ -1.39
CD48P09326 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.36□□□□□ -1.39
CD48P09326 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.36□□□□□ -1.39
CD48P09326 GLYATL1P2-202ENST00000588046 902 ntBASIC6.36□□□□□ -1.39
CD48P09326 AC004890.3-201ENST00000605566 1095 ntBASIC6.36□□□□□ -1.39
CD48P09326 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.36□□□□□ -1.39
CD48P09326 AC010325.3-201ENST00000641084 394 ntBASIC6.36□□□□□ -1.39
CD48P09326 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CD48P09326 AC024651.2-201ENST00000562480 2098 ntBASIC6.36□□□□□ -1.39
CD48P09326 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CD48P09326 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.36□□□□□ -1.39
CD48P09326 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD48P09326 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD48P09326 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CD48P09326 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD48P09326 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD48P09326 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD48P09326 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD48P09326 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.35□□□□□ -1.39
CD48P09326 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.35□□□□□ -1.39
CD48P09326 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 MIR191-201ENST00000384873 92 ntBASIC6.35□□□□□ -1.39
CD48P09326 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.35□□□□□ -1.39
CD48P09326 RPSAP32-201ENST00000432681 526 ntBASIC6.35□□□□□ -1.39
CD48P09326 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CD48P09326 AL645936.1-201ENST00000441979 518 ntBASIC6.35□□□□□ -1.39
CD48P09326 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.35□□□□□ -1.39
CD48P09326 KF459542.1-201ENST00000450908 553 ntBASIC6.35□□□□□ -1.39
CD48P09326 RPL7L1P3-201ENST00000455249 689 ntBASIC6.35□□□□□ -1.39
CD48P09326 RN7SL552P-201ENST00000462094 276 ntBASIC6.35□□□□□ -1.39
CD48P09326 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.35□□□□□ -1.39
CD48P09326 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.35□□□□□ -1.39
CD48P09326 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.35□□□□□ -1.39
CD48P09326 SNX18P25-201ENST00000510539 758 ntBASIC6.35□□□□□ -1.39
CD48P09326 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.35□□□□□ -1.39
CD48P09326 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.35□□□□□ -1.39
CD48P09326 AC021269.1-201ENST00000526860 705 ntBASIC6.35□□□□□ -1.39
CD48P09326 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.35□□□□□ -1.39
CD48P09326 AC004232.2-201ENST00000574245 821 ntBASIC6.35□□□□□ -1.39
CD48P09326 AP005136.2-201ENST00000583253 1049 ntBASIC6.35□□□□□ -1.39
CD48P09326 MIR132-201ENST00000591554 101 ntBASIC6.35□□□□□ -1.39
CD48P09326 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.35□□□□□ -1.39
CD48P09326 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.35□□□□□ -1.39
CD48P09326 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.35□□□□□ -1.39
CD48P09326 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CD48P09326 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CD48P09326 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 AP000432.2-201ENST00000624164 2048 ntBASIC6.35□□□□□ -1.39
CD48P09326 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.35□□□□□ -1.39
CD48P09326 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CD48P09326 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CD48P09326 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.34□□□□□ -1.39
CD48P09326 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
CD48P09326 AC022325.1-201ENST00000502748 2199 ntBASIC6.34□□□□□ -1.39
CD48P09326 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CD48P09326 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CD48P09326 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CD48P09326 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.34□□□□□ -1.39
CD48P09326 SAMMSON-210ENST00000641260 1308 ntBASIC6.34□□□□□ -1.39
CD48P09326 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.34□□□□□ -1.39
CD48P09326 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CD48P09326 AL731532.1-201ENST00000623972 4236 ntBASIC6.34□□□□□ -1.39
CD48P09326 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
CD48P09326 MIR188-201ENST00000385034 86 ntBASIC6.34□□□□□ -1.39
CD48P09326 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.34□□□□□ -1.39
CD48P09326 AL035422.1-201ENST00000414193 397 ntBASIC6.34□□□□□ -1.39
CD48P09326 PTCD2P2-201ENST00000415579 1095 ntBASIC6.34□□□□□ -1.39
CD48P09326 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.34□□□□□ -1.39
CD48P09326 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.34□□□□□ -1.39
CD48P09326 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.34□□□□□ -1.39
CD48P09326 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.34□□□□□ -1.39
CD48P09326 PSMD10P2-201ENST00000432890 672 ntBASIC6.34□□□□□ -1.39
CD48P09326 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms