Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.79□□□□□ -1.32
CHRNA1P02708 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.79□□□□□ -1.32
CHRNA1P02708 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.79□□□□□ -1.32
CHRNA1P02708 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.79□□□□□ -1.32
CHRNA1P02708 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.79□□□□□ -1.32
CHRNA1P02708 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.79□□□□□ -1.32
CHRNA1P02708 AC097467.4-201ENST00000605504 141 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 AC006924.1-201ENST00000610750 559 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 MIR6809-201ENST00000612189 116 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 AC127024.6-201ENST00000621598 424 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.79□□□□□ -1.32
CHRNA1P02708 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.79□□□□□ -1.32
CHRNA1P02708 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.79□□□□□ -1.32
CHRNA1P02708 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.79□□□□□ -1.32
CHRNA1P02708 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
CHRNA1P02708 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.79□□□□□ -1.32
CHRNA1P02708 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.79□□□□□ -1.32
CHRNA1P02708 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CHRNA1P02708 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CHRNA1P02708 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.79□□□□□ -1.32
CHRNA1P02708 AC005034.3-201ENST00000604845 1747 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CHRNA1P02708 PABPC1P8-201ENST00000452851 2086 ntBASIC6.78□□□□□ -1.32
CHRNA1P02708 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.78□□□□□ -1.32
CHRNA1P02708 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
CHRNA1P02708 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.78□□□□□ -1.32
CHRNA1P02708 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHRNA1P02708 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHRNA1P02708 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHRNA1P02708 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHRNA1P02708 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
CHRNA1P02708 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHRNA1P02708 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CHRNA1P02708 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.78□□□□□ -1.32
CHRNA1P02708 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CHRNA1P02708 AL445238.1-204ENST00000400311 463 ntBASIC6.78□□□□□ -1.32
CHRNA1P02708 AL354890.1-201ENST00000413730 346 ntBASIC6.78□□□□□ -1.32
CHRNA1P02708 AK3P5-201ENST00000432033 519 ntBASIC6.78□□□□□ -1.32
CHRNA1P02708 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.78□□□□□ -1.32
CHRNA1P02708 GAPDHP23-201ENST00000444823 993 ntBASIC6.78□□□□□ -1.32
CHRNA1P02708 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.78□□□□□ -1.32
CHRNA1P02708 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.78□□□□□ -1.32
CHRNA1P02708 UBFD1P1-201ENST00000473259 814 ntBASIC6.78□□□□□ -1.32
CHRNA1P02708 RN7SL273P-201ENST00000481561 299 ntBASIC6.78□□□□□ -1.32
CHRNA1P02708 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.78□□□□□ -1.32
CHRNA1P02708 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.78□□□□□ -1.32
CHRNA1P02708 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CHRNA1P02708 AC092865.1-201ENST00000544395 1023 ntBASIC6.78□□□□□ -1.32
CHRNA1P02708 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.78□□□□□ -1.32
CHRNA1P02708 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.78□□□□□ -1.32
CHRNA1P02708 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.78□□□□□ -1.32
CHRNA1P02708 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.78□□□□□ -1.32
CHRNA1P02708 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.78□□□□□ -1.32
CHRNA1P02708 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.78□□□□□ -1.32
CHRNA1P02708 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CHRNA1P02708 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHRNA1P02708 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
CHRNA1P02708 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CHRNA1P02708 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CHRNA1P02708 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
CHRNA1P02708 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHRNA1P02708 AC024651.2-201ENST00000562480 2098 ntBASIC6.78□□□□□ -1.32
CHRNA1P02708 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.78□□□□□ -1.32
CHRNA1P02708 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CHRNA1P02708 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.78□□□□□ -1.32
CHRNA1P02708 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CHRNA1P02708 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.78□□□□□ -1.32
CHRNA1P02708 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CHRNA1P02708 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CHRNA1P02708 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CHRNA1P02708 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.77□□□□□ -1.33
CHRNA1P02708 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.77□□□□□ -1.33
CHRNA1P02708 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CHRNA1P02708 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.77□□□□□ -1.33
CHRNA1P02708 OR52B3P-201ENST00000314715 928 ntBASIC6.77□□□□□ -1.33
CHRNA1P02708 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CHRNA1P02708 TMSB4XP4-201ENST00000323496 618 ntBASIC6.77□□□□□ -1.33
CHRNA1P02708 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CHRNA1P02708 RNA5SP478-201ENST00000364657 115 ntBASIC6.77□□□□□ -1.33
CHRNA1P02708 RN7SKP229-201ENST00000410465 302 ntBASIC6.77□□□□□ -1.33
CHRNA1P02708 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.77□□□□□ -1.33
CHRNA1P02708 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.77□□□□□ -1.33
CHRNA1P02708 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.77□□□□□ -1.33
CHRNA1P02708 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.77□□□□□ -1.33
CHRNA1P02708 VN1R110P-201ENST00000438988 971 ntBASIC6.77□□□□□ -1.33
CHRNA1P02708 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CHRNA1P02708 AC093719.1-201ENST00000480427 441 ntBASIC6.77□□□□□ -1.33
CHRNA1P02708 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms