Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC007671.1-201ENST00000616957 830 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 AC106782.7-201ENST00000624024 418 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 AC133555.5-201ENST00000624430 418 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.02□□□□□ -1.45
PDLIM1O00151 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
PDLIM1O00151 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.02□□□□□ -1.45
PDLIM1O00151 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.02□□□□□ -1.45
PDLIM1O00151 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDLIM1O00151 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.01□□□□□ -1.45
PDLIM1O00151 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PDLIM1O00151 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PDLIM1O00151 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.01□□□□□ -1.45
PDLIM1O00151 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
PDLIM1O00151 AC002525.1-201ENST00000624392 1622 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 RNA5SP382-201ENST00000363355 112 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.01□□□□□ -1.45
PDLIM1O00151 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.01□□□□□ -1.45
PDLIM1O00151 RNA5SP474-201ENST00000391234 90 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.01□□□□□ -1.45
PDLIM1O00151 U3.43-201ENST00000410734 213 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.01□□□□□ -1.45
PDLIM1O00151 AL672212.1-201ENST00000422246 400 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.01□□□□□ -1.45
PDLIM1O00151 SPATA20P1-201ENST00000423089 438 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.01□□□□□ -1.45
PDLIM1O00151 AHCYP8-201ENST00000425108 209 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.01□□□□□ -1.45
PDLIM1O00151 RPS10P21-201ENST00000430654 475 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 KRT8P51-201ENST00000438938 274 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 HMGN1P32-201ENST00000441744 256 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 BMS1P11-201ENST00000442351 885 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.01□□□□□ -1.45
PDLIM1O00151 AC092967.1-201ENST00000449016 481 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 OSTCP1-201ENST00000455507 450 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 BMS1P9-201ENST00000457640 885 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.01□□□□□ -1.45
PDLIM1O00151 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.01□□□□□ -1.45
PDLIM1O00151 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.01□□□□□ -1.45
PDLIM1O00151 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.01□□□□□ -1.45
PDLIM1O00151 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.01□□□□□ -1.45
PDLIM1O00151 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.01□□□□□ -1.45
PDLIM1O00151 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.01□□□□□ -1.45
PDLIM1O00151 AC093878.1-201ENST00000515630 432 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.01□□□□□ -1.45
PDLIM1O00151 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.01□□□□□ -1.45
PDLIM1O00151 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.01□□□□□ -1.45
PDLIM1O00151 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.01□□□□□ -1.45
PDLIM1O00151 AC089984.3-201ENST00000552838 363 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.01□□□□□ -1.45
PDLIM1O00151 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.01□□□□□ -1.45
PDLIM1O00151 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.01□□□□□ -1.45
PDLIM1O00151 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 AL034546.1-201ENST00000623740 3693 ntBASIC6.01□□□□□ -1.45
PDLIM1O00151 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
PDLIM1O00151 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PDLIM1O00151 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.01□□□□□ -1.45
PDLIM1O00151 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDLIM1O00151 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDLIM1O00151 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
PDLIM1O00151 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDLIM1O00151 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDLIM1O00151 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
PDLIM1O00151 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6□□□□□ -1.45
PDLIM1O00151 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6□□□□□ -1.45
PDLIM1O00151 MRPS21P5-201ENST00000417885 231 ntBASIC6□□□□□ -1.45
PDLIM1O00151 HSPE1P16-201ENST00000426640 348 ntBASIC6□□□□□ -1.45
PDLIM1O00151 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6□□□□□ -1.45
PDLIM1O00151 AL136231.1-201ENST00000429407 730 ntBASIC6□□□□□ -1.45
PDLIM1O00151 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6□□□□□ -1.45
PDLIM1O00151 NPM1P18-201ENST00000434232 732 ntBASIC6□□□□□ -1.45
PDLIM1O00151 AL022324.2-201ENST00000434827 780 ntBASIC6□□□□□ -1.45
PDLIM1O00151 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6□□□□□ -1.45
PDLIM1O00151 PFN1P11-201ENST00000445829 389 ntBASIC6□□□□□ -1.45
PDLIM1O00151 AL161722.1-201ENST00000446972 1032 ntBASIC6□□□□□ -1.45
PDLIM1O00151 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6□□□□□ -1.45
PDLIM1O00151 RN7SL790P-201ENST00000474043 298 ntBASIC6□□□□□ -1.45
PDLIM1O00151 RPL7AP23-201ENST00000482625 776 ntBASIC6□□□□□ -1.45
PDLIM1O00151 EIF3LP3-201ENST00000495197 822 ntBASIC6□□□□□ -1.45
PDLIM1O00151 RNA5SP230-201ENST00000517039 122 ntBASIC6□□□□□ -1.45
PDLIM1O00151 AC008429.4-201ENST00000521201 182 ntBASIC6□□□□□ -1.45
PDLIM1O00151 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6□□□□□ -1.45
PDLIM1O00151 OR4A43P-201ENST00000532938 908 ntBASIC6□□□□□ -1.45
PDLIM1O00151 SETP17-201ENST00000534163 817 ntBASIC6□□□□□ -1.45
PDLIM1O00151 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6□□□□□ -1.45
PDLIM1O00151 LSM3P2-201ENST00000551246 273 ntBASIC6□□□□□ -1.45
PDLIM1O00151 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 373.4 ms