Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 RPL3P13-201ENST00000550415 216 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SRRM4A7MD48 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 AC023968.1-201ENST00000560719 475 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 FAM60CP-201ENST00000591086 664 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 AL589863.1-201ENST00000595383 631 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SRRM4A7MD48 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 MIR6883-201ENST00000614952 78 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRRM4A7MD48 AF117829.2-201ENST00000619538 361 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRRM4A7MD48 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SRRM4A7MD48 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRRM4A7MD48 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SRRM4A7MD48 HSPD1P8-201ENST00000400121 1658 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SRRM4A7MD48 AC125238.2-201ENST00000430003 1440 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SRRM4A7MD48 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 RNA5SP85-201ENST00000365378 119 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 LCN1P2-201ENST00000372030 223 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SRRM4A7MD48 AL033519.1-201ENST00000407266 307 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 MIR1266-201ENST00000408125 84 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 BMP6P1-201ENST00000431230 679 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 Z85994.2-201ENST00000434327 452 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 MAPRE1P3-201ENST00000435438 796 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 GTF2IP14-201ENST00000441415 586 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 NPM1P9-201ENST00000453156 844 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 RPS27AP3-201ENST00000453803 454 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 VPS25P1-201ENST00000455691 508 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SRRM4A7MD48 RN7SL413P-201ENST00000482700 297 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 AC093325.1-201ENST00000508378 326 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 RNU6-362P-201ENST00000516736 90 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 OR4A40P-201ENST00000533878 948 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 OR4A6P-201ENST00000534364 970 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 OR4H6P-201ENST00000563771 921 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 AC027796.1-201ENST00000575593 512 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 MIR3189-201ENST00000578735 73 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 AC005332.4-201ENST00000592752 579 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 AC036176.3-201ENST00000602456 418 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 AL591222.2-201ENST00000604443 754 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 AC025262.3-201ENST00000623666 360 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 AC135068.11-201ENST00000636378 921 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 AL161901.1-201ENST00000624954 3425 ntBASIC5.09□□□□□ -1.59
SRRM4A7MD48 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.09□□□□□ -1.59
SRRM4A7MD48 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SRRM4A7MD48 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SRRM4A7MD48 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.09□□□□□ -1.6
SRRM4A7MD48 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.6
SRRM4A7MD48 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SRRM4A7MD48 AC079753.1-201ENST00000623243 3868 ntBASIC5.09□□□□□ -1.6
SRRM4A7MD48 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SRRM4A7MD48 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SRRM4A7MD48 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SRRM4A7MD48 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SRRM4A7MD48 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SRRM4A7MD48 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
SRRM4A7MD48 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SRRM4A7MD48 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 MTCO1P28-201ENST00000574177 1528 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms