Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AL132780.5-201ENST00000623843 1625 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 DPH3-202ENST00000383775 3052 ntTSL 2 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 RSRC1-201ENST00000295930 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 RSRC1-215ENST00000611884 1738 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 ACTA2-201ENST00000224784 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 CASC19-246ENST00000641625 1606 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC010320.4-201ENST00000594379 1905 ntTSL 2 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 RPL21-201ENST00000272274 616 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 RNA5SP174-201ENST00000362702 118 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 RAET1E-202ENST00000367363 817 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 PAGE1-201ENST00000376150 665 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 RNU6-921P-201ENST00000384361 107 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 MTCO3P40-201ENST00000392516 676 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC096632.1-201ENST00000427395 310 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 NPM1P34-201ENST00000428821 893 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC245036.3-201ENST00000429259 146 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AL772155.1-201ENST00000431077 347 ntTSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AL121601.2-201ENST00000438019 707 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC092013.1-201ENST00000438795 332 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 TMEM256P2-201ENST00000440241 341 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 LINC01526-201ENST00000441949 520 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 MTND6P13-201ENST00000443510 523 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AL031597.1-201ENST00000447383 432 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 BPI-205ENST00000479646 383 ntTSL 2 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC092958.1-202ENST00000485006 424 ntTSL 3 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AP002852.1-201ENST00000489699 385 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC109462.1-201ENST00000491087 368 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 NPY6R-201ENST00000503807 1112 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC098680.1-201ENST00000506010 367 ntTSL 3 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 CD3E-204ENST00000528600 1289 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC087521.2-203ENST00000530450 593 ntTSL 4 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AP003396.2-201ENST00000533726 1297 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC018716.1-201ENST00000534604 561 ntTSL 4 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 OR7E106P-201ENST00000556941 1021 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 SLC25A36P1-201ENST00000590111 465 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 RPS16-207ENST00000601655 492 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 LARP7P1-201ENST00000605576 316 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC131025.2-201ENST00000622374 422 ntTSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AL627171.2-202ENST00000634923 923 ntTSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 MIR6863-201ENST00000636112 90 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AL034370.1-201ENST00000397254 1590 ntBASIC10.16□□□□□ -0.78
RTN4Q9NQC3 CD59-202ENST00000395850 1889 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 SDCBP-212ENST00000523483 3589 ntTSL 2 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 RND3-203ENST00000409557 2372 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTN4Q9NQC3 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 LINC01184-203ENST00000501652 1601 ntTSL 2 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms