Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 KCTD9P6-201ENST00000522306 950 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 CCNG2P1-201ENST00000549521 1000 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AL049830.4-201ENST00000555149 351 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AL133241.1-201ENST00000556832 487 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AL358334.1-201ENST00000557152 174 ntTSL 5 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC009997.1-201ENST00000557862 129 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 MIR4793-201ENST00000577502 87 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 SNORA70D-201ENST00000578836 135 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 DUXAP11-201ENST00000603858 526 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC011451.2-201ENST00000604303 598 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AP003973.1-201ENST00000604639 691 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AL365181.4-201ENST00000609800 547 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC121761.2-201ENST00000617300 689 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC239600.2-201ENST00000619615 1165 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AL356266.1-201ENST00000623311 483 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 C1orf137-201ENST00000624685 386 ntTSL 3 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 FP325313.1-201ENST00000638228 703 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AL354702.2-202ENST00000641481 890 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AP000641.1-201ENST00000531988 1639 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SSU72Q9NP77 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SSU72Q9NP77 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SSU72Q9NP77 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SSU72Q9NP77 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SSU72Q9NP77 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
SSU72Q9NP77 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SSU72Q9NP77 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SSU72Q9NP77 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SSU72Q9NP77 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AL117339.4-201ENST00000608335 7063 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SSU72Q9NP77 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SSU72Q9NP77 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SSU72Q9NP77 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 PCNAP3-201ENST00000397222 778 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 RN7SKP271-201ENST00000410528 320 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 CASP3P1-201ENST00000446037 609 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 SAP18P3-201ENST00000449663 396 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 RN7SL251P-201ENST00000464175 297 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 RN7SL259P-201ENST00000478499 253 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC107029.1-201ENST00000484675 465 ntTSL 2 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 RN7SL797P-201ENST00000486314 297 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 AP005202.1-201ENST00000489915 867 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC090058.1-201ENST00000498788 435 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 LTV1P1-201ENST00000510683 1237 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 OR5H4P-201ENST00000510851 923 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC022447.1-201ENST00000515358 464 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 OR5G4P-201ENST00000525251 760 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AP002004.1-206ENST00000532441 876 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC034105.2-201ENST00000561866 238 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC244034.2-201ENST00000562504 509 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 DNM1P31-201ENST00000564149 696 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC012254.4-201ENST00000588843 273 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms