Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.88□□□□□ -1.15
TRIM11Q96F44 AC061975.7-201ENST00000592016 2692 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM11Q96F44 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM11Q96F44 ABCA11P-202ENST00000504019 2110 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM11Q96F44 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC016716.1-201ENST00000265882 708 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 UBE2D3-205ENST00000350435 711 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 RNU1-21P-201ENST00000363327 163 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM11Q96F44 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM11Q96F44 SSX6-201ENST00000376932 562 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM11Q96F44 SNORA35-201ENST00000386104 128 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 MSRB1P1-201ENST00000396851 354 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM11Q96F44 CNN3P1-201ENST00000401596 935 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 ARL2BPP3-201ENST00000421226 480 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AL392003.1-201ENST00000434394 243 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC055733.3-201ENST00000505214 523 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC109458.1-201ENST00000508858 316 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 CR383658.1-201ENST00000514609 734 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 OR7E96P-201ENST00000530816 976 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 BMS1P15-201ENST00000554269 1141 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC090695.1-201ENST00000561269 1222 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC106791.2-201ENST00000604680 391 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 CUX2P1-201ENST00000606426 298 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC097381.3-201ENST00000608962 462 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 AP000255.1-201ENST00000610276 676 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 PART1_1.1-201ENST00000611761 217 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC007671.1-201ENST00000616957 830 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AL590410.1-201ENST00000617925 333 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 AF246928.1-201ENST00000623768 87 ntBASIC7.87□□□□□ -1.15
TRIM11Q96F44 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM11Q96F44 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM11Q96F44 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM11Q96F44 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM11Q96F44 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM11Q96F44 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.86□□□□□ -1.15
TRIM11Q96F44 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM11Q96F44 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM11Q96F44 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM11Q96F44 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
TRIM11Q96F44 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.86□□□□□ -1.15
TRIM11Q96F44 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM11Q96F44 AL078621.1-201ENST00000272567 768 ntBASIC7.86□□□□□ -1.15
TRIM11Q96F44 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM11Q96F44 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM11Q96F44 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM11Q96F44 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM11Q96F44 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM11Q96F44 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.86□□□□□ -1.15
TRIM11Q96F44 RPL4P4-201ENST00000422486 1284 ntBASIC7.86□□□□□ -1.15
TRIM11Q96F44 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.86□□□□□ -1.15
TRIM11Q96F44 KRT18P53-201ENST00000431919 117 ntBASIC7.86□□□□□ -1.15
TRIM11Q96F44 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms