Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 AC132219.2-201ENST00000624416 2327 ntBASIC6.94□□□□□ -1.3
HERVK_113Q902F9 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 SNORD16-201ENST00000362803 99 ntBASIC6.94□□□□□ -1.3
HERVK_113Q902F9 Y_RNA.62-201ENST00000362840 99 ntBASIC6.94□□□□□ -1.3
HERVK_113Q902F9 MIR143-201ENST00000385300 106 ntBASIC6.94□□□□□ -1.3
HERVK_113Q902F9 EEF1B2P8-201ENST00000414101 671 ntBASIC6.94□□□□□ -1.3
HERVK_113Q902F9 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 VN1R38P-201ENST00000450265 887 ntBASIC6.94□□□□□ -1.3
HERVK_113Q902F9 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 RPS27AP2-201ENST00000457576 465 ntBASIC6.94□□□□□ -1.3
HERVK_113Q902F9 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 AC108043.1-201ENST00000512696 574 ntBASIC6.94□□□□□ -1.3
HERVK_113Q902F9 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 RNA5SP438-201ENST00000516561 112 ntBASIC6.94□□□□□ -1.3
HERVK_113Q902F9 TMEM97P2-201ENST00000517841 403 ntBASIC6.94□□□□□ -1.3
HERVK_113Q902F9 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 MIR4700-201ENST00000578311 74 ntBASIC6.94□□□□□ -1.3
HERVK_113Q902F9 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.94□□□□□ -1.3
HERVK_113Q902F9 GMCL1P2-201ENST00000605230 823 ntBASIC6.94□□□□□ -1.3
HERVK_113Q902F9 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 MIR6719-201ENST00000622428 87 ntBASIC6.94□□□□□ -1.3
HERVK_113Q902F9 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HERVK_113Q902F9 CASC19-255ENST00000641733 1385 ntBASIC6.94□□□□□ -1.3
HERVK_113Q902F9 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 AC015689.2-201ENST00000528172 1738 ntBASIC6.93□□□□□ -1.3
HERVK_113Q902F9 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 RNA5SP346-201ENST00000363541 121 ntBASIC6.93□□□□□ -1.3
HERVK_113Q902F9 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 AL157884.1-201ENST00000424561 454 ntBASIC6.93□□□□□ -1.3
HERVK_113Q902F9 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 RPS23P1-201ENST00000491662 432 ntBASIC6.93□□□□□ -1.3
HERVK_113Q902F9 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 MTND6P8-201ENST00000503471 522 ntBASIC6.93□□□□□ -1.3
HERVK_113Q902F9 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 ATP5LP3-201ENST00000514223 304 ntBASIC6.93□□□□□ -1.3
HERVK_113Q902F9 RNU6-943P-201ENST00000516960 98 ntBASIC6.93□□□□□ -1.3
HERVK_113Q902F9 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 SNORA70D-201ENST00000578836 135 ntBASIC6.93□□□□□ -1.3
HERVK_113Q902F9 SNORD95-201ENST00000579879 68 ntBASIC6.93□□□□□ -1.3
HERVK_113Q902F9 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 AC009303.3-201ENST00000591103 736 ntBASIC6.93□□□□□ -1.3
HERVK_113Q902F9 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 AP001823.1-201ENST00000604056 1003 ntBASIC6.93□□□□□ -1.3
HERVK_113Q902F9 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 AC130456.6-201ENST00000623745 765 ntBASIC6.93□□□□□ -1.3
HERVK_113Q902F9 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 NCOA4P3-201ENST00000513203 1877 ntBASIC6.93□□□□□ -1.3
HERVK_113Q902F9 AL136984.1-201ENST00000607611 1893 ntBASIC6.93□□□□□ -1.3
HERVK_113Q902F9 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HERVK_113Q902F9 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms