Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.79□□□□□ -1.64
VPS13CQ709C8 Z84478.1-201ENST00000438230 1219 ntBASIC4.79□□□□□ -1.64
VPS13CQ709C8 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
VPS13CQ709C8 AC010343.2-201ENST00000510162 224 ntBASIC4.79□□□□□ -1.64
VPS13CQ709C8 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS13CQ709C8 AC004825.1-201ENST00000555068 586 ntBASIC4.79□□□□□ -1.64
VPS13CQ709C8 AC027348.2-201ENST00000624375 642 ntBASIC4.79□□□□□ -1.64
VPS13CQ709C8 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS13CQ709C8 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS13CQ709C8 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC4.79□□□□□ -1.64
VPS13CQ709C8 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
VPS13CQ709C8 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS13CQ709C8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
VPS13CQ709C8 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS13CQ709C8 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS13CQ709C8 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS13CQ709C8 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS13CQ709C8 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS13CQ709C8 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS13CQ709C8 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
VPS13CQ709C8 AC131649.2-201ENST00000624925 4439 ntBASIC4.79□□□□□ -1.64
VPS13CQ709C8 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS13CQ709C8 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS13CQ709C8 RN7SKP213-201ENST00000410746 298 ntBASIC4.79□□□□□ -1.64
VPS13CQ709C8 AL139128.1-201ENST00000413921 941 ntBASIC4.79□□□□□ -1.64
VPS13CQ709C8 RPS27P18-201ENST00000431701 247 ntBASIC4.79□□□□□ -1.64
VPS13CQ709C8 CUBNP2-201ENST00000443534 1139 ntBASIC4.79□□□□□ -1.64
VPS13CQ709C8 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS13CQ709C8 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS13CQ709C8 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS13CQ709C8 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS13CQ709C8 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS13CQ709C8 LINC01739-205ENST00000641890 573 ntBASIC4.79□□□□□ -1.64
VPS13CQ709C8 GTF2IP4-201ENST00000453092 2054 ntBASIC4.79□□□□□ -1.64
VPS13CQ709C8 PCYT1A-201ENST00000292823 5597 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS13CQ709C8 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 SLC25A3-203ENST00000401722 6087 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 BEND3-201ENST00000369042 6200 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 SNORA17.1-201ENST00000362945 126 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 CHMP1B2P-201ENST00000399581 597 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 AC009804.1-201ENST00000400949 179 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 AL390774.1-201ENST00000411924 246 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 RAB28P2-201ENST00000454299 641 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 RN7SL817P-201ENST00000480777 288 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 AC008897.1-201ENST00000494006 347 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 AC008629.2-201ENST00000503783 483 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 AC000068.2-201ENST00000608816 460 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 RNA5SP478-201ENST00000364657 115 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 AC099677.3-201ENST00000427081 395 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 RN7SL738P-201ENST00000470264 297 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 AC096741.1-201ENST00000472250 846 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 RPL7P6-201ENST00000480903 738 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 AC147055.3-201ENST00000510547 851 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 AL132640.3-201ENST00000630473 177 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 AC005725.1-201ENST00000577346 2607 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS13CQ709C8 AL133325.1-201ENST00000421090 382 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 AC006463.2-201ENST00000473326 348 ntBASIC4.78□□□□□ -1.64
VPS13CQ709C8 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS13CQ709C8 GARSP1-201ENST00000570895 719 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms