Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RNU6-1331P-201ENST00000363658 106 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 RN7SKP237-201ENST00000364663 301 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 RNU6-650P-201ENST00000365658 111 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 MIR122-201ENST00000385044 85 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AL050335.1-201ENST00000396909 869 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 RNA5SP251-201ENST00000410614 137 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 RN7SKP137-201ENST00000411074 307 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AC116036.1-201ENST00000412199 367 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 SNRPEP5-201ENST00000425442 278 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 CR391992.1-201ENST00000438601 394 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AL513321.1-201ENST00000441175 761 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AL354714.5-201ENST00000450131 590 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 RN7SL149P-201ENST00000465197 281 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 CABYRP1-201ENST00000465493 1045 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 CBX5P1-201ENST00000468470 561 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 NPM1P27-201ENST00000502784 830 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AC114322.1-201ENST00000506771 926 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AC106785.4-201ENST00000569492 412 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AC010547.7-201ENST00000570323 333 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 MIMT1-201ENST00000597105 1050 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AC018926.1-201ENST00000616335 435 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 BNIP3P41-202ENST00000616656 861 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 DDX18P6-201ENST00000450119 1997 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 RNU6-697P-201ENST00000363348 107 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 RNU1-55P-201ENST00000365510 158 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 RN7SKP39-201ENST00000410773 322 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 RPL12P10-201ENST00000413498 498 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 RPL23AP18-201ENST00000416139 468 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 RPS17P17-201ENST00000419392 409 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 Z68868.1-201ENST00000429048 544 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 ZNF965P-201ENST00000432501 817 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 MTND1P26-201ENST00000440488 538 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 SRP68P2-201ENST00000456184 254 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AL096803.1-201ENST00000456921 1021 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 RPSAP24-201ENST00000461543 873 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AC093663.2-201ENST00000484625 313 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms