Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
VPS72Q15906 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
VPS72Q15906 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS72Q15906 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS72Q15906 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.19□□□□□ -1.1
VPS72Q15906 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS72Q15906 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
VPS72Q15906 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VPS72Q15906 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
VPS72Q15906 AL590240.2-201ENST00000413370 894 ntBASIC8.19□□□□□ -1.1
VPS72Q15906 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS72Q15906 AC017099.1-201ENST00000448261 1028 ntBASIC8.19□□□□□ -1.1
VPS72Q15906 RNA5SP92-201ENST00000516437 110 ntBASIC8.19□□□□□ -1.1
VPS72Q15906 RNU6-362P-201ENST00000516736 90 ntBASIC8.19□□□□□ -1.1
VPS72Q15906 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC8.19□□□□□ -1.1
VPS72Q15906 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS72Q15906 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VPS72Q15906 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS72Q15906 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS72Q15906 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS72Q15906 AC015802.2-201ENST00000589690 189 ntBASIC8.19□□□□□ -1.1
VPS72Q15906 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC8.19□□□□□ -1.1
VPS72Q15906 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VPS72Q15906 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS72Q15906 AL357562.1-201ENST00000624911 609 ntBASIC8.19□□□□□ -1.1
VPS72Q15906 AL449283.1-201ENST00000602631 3403 ntBASIC8.19□□□□□ -1.1
VPS72Q15906 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS72Q15906 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS72Q15906 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
VPS72Q15906 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
VPS72Q15906 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS72Q15906 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
VPS72Q15906 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
VPS72Q15906 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC8.19□□□□□ -1.1
VPS72Q15906 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VPS72Q15906 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC8.18□□□□□ -1.1
VPS72Q15906 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS72Q15906 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS72Q15906 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS72Q15906 AP004289.1-201ENST00000436307 2205 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS72Q15906 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS72Q15906 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
VPS72Q15906 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
VPS72Q15906 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS72Q15906 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC8.18□□□□□ -1.1
VPS72Q15906 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS72Q15906 AC103591.2-201ENST00000265259 766 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
VPS72Q15906 RN7SKP124-201ENST00000364730 341 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 AL645927.1-201ENST00000396783 406 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 AL133270.1-201ENST00000402635 279 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 MIR1286-201ENST00000408112 78 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC8.18□□□□□ -1.1
VPS72Q15906 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS72Q15906 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS72Q15906 AC127526.2-201ENST00000426436 775 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC8.18□□□□□ -1.1
VPS72Q15906 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC8.18□□□□□ -1.1
VPS72Q15906 ZNF619P1-201ENST00000446539 752 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 AP000926.3-201ENST00000497201 299 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.18□□□□□ -1.1
VPS72Q15906 HIGD1AP5-201ENST00000529959 259 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
VPS72Q15906 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC8.18□□□□□ -1.1
VPS72Q15906 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS72Q15906 AL008723.3-201ENST00000608926 449 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS72Q15906 AC007204.2-201ENST00000615022 616 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS72Q15906 AC021766.1-201ENST00000624404 741 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 NEK2P2-201ENST00000438441 1338 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 AC233968.1-201ENST00000611212 1300 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS72Q15906 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
VPS72Q15906 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VPS72Q15906 GNL2P1-201ENST00000451274 2190 ntBASIC8.18□□□□□ -1.1
VPS72Q15906 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS72Q15906 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC8.18□□□□□ -1.1
VPS72Q15906 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS72Q15906 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS72Q15906 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.17□□□□□ -1.1
VPS72Q15906 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VPS72Q15906 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
VPS72Q15906 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VPS72Q15906 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
VPS72Q15906 AL139384.2-201ENST00000613809 3590 ntBASIC8.17□□□□□ -1.1
VPS72Q15906 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.17□□□□□ -1.1
VPS72Q15906 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
VPS72Q15906 RNA5SP394-201ENST00000364216 119 ntBASIC8.17□□□□□ -1.1
VPS72Q15906 RPL5P5-201ENST00000392009 893 ntBASIC8.17□□□□□ -1.1
VPS72Q15906 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC8.17□□□□□ -1.1
VPS72Q15906 RPA2P2-201ENST00000419698 796 ntBASIC8.17□□□□□ -1.1
VPS72Q15906 RPL5P9-201ENST00000448118 886 ntBASIC8.17□□□□□ -1.1
VPS72Q15906 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC8.17□□□□□ -1.1
VPS72Q15906 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VPS72Q15906 AC112184.1-201ENST00000505179 312 ntBASIC8.17□□□□□ -1.1
VPS72Q15906 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC8.17□□□□□ -1.1
VPS72Q15906 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC8.17□□□□□ -1.1
VPS72Q15906 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms