Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC024589.2-201ENST00000605642 1294 ntBASIC6.1□□□□□ -1.43
RAE1P78406 AC026979.4-201ENST00000606555 645 ntBASIC6.1□□□□□ -1.43
RAE1P78406 GAPDHP41-201ENST00000613707 975 ntBASIC6.1□□□□□ -1.43
RAE1P78406 AC104763.3-201ENST00000613765 618 ntBASIC6.1□□□□□ -1.43
RAE1P78406 AC008147.4-201ENST00000617570 1204 ntBASIC6.1□□□□□ -1.43
RAE1P78406 AC022960.3-201ENST00000619794 441 ntBASIC6.1□□□□□ -1.43
RAE1P78406 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.1□□□□□ -1.43
RAE1P78406 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RAE1P78406 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
RAE1P78406 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RAE1P78406 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RAE1P78406 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RAE1P78406 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RAE1P78406 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RAE1P78406 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.1□□□□□ -1.43
RAE1P78406 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.1□□□□□ -1.43
RAE1P78406 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RAE1P78406 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RAE1P78406 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.09□□□□□ -1.43
RAE1P78406 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RAE1P78406 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RAE1P78406 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RAE1P78406 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
RAE1P78406 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RAE1P78406 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RAE1P78406 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
RAE1P78406 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RAE1P78406 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
RAE1P78406 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RAE1P78406 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RAE1P78406 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
RAE1P78406 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RAE1P78406 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RAE1P78406 SNORD8-201ENST00000363915 110 ntBASIC6.09□□□□□ -1.43
RAE1P78406 RNU1-84P-201ENST00000365447 164 ntBASIC6.09□□□□□ -1.43
RAE1P78406 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RAE1P78406 RNA5SP155-201ENST00000411154 129 ntBASIC6.09□□□□□ -1.43
RAE1P78406 TMA16P2-201ENST00000413187 601 ntBASIC6.09□□□□□ -1.43
RAE1P78406 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.09□□□□□ -1.43
RAE1P78406 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.09□□□□□ -1.43
RAE1P78406 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.09□□□□□ -1.43
RAE1P78406 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.09□□□□□ -1.43
RAE1P78406 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.09□□□□□ -1.43
RAE1P78406 RNU6-491P-201ENST00000516099 110 ntBASIC6.09□□□□□ -1.43
RAE1P78406 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.09□□□□□ -1.43
RAE1P78406 SEC11B-201ENST00000518383 499 ntBASIC6.09□□□□□ -1.43
RAE1P78406 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RAE1P78406 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.09□□□□□ -1.43
RAE1P78406 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.09□□□□□ -1.43
RAE1P78406 OR9G2P-201ENST00000533326 880 ntBASIC6.09□□□□□ -1.43
RAE1P78406 CKS1BP1-201ENST00000555221 240 ntBASIC6.09□□□□□ -1.43
RAE1P78406 TPRX1P1-201ENST00000557620 319 ntBASIC6.09□□□□□ -1.43
RAE1P78406 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.09□□□□□ -1.43
RAE1P78406 AC093510.2-201ENST00000562820 896 ntBASIC6.09□□□□□ -1.43
RAE1P78406 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.09□□□□□ -1.43
RAE1P78406 AC079148.1-201ENST00000565944 819 ntBASIC6.09□□□□□ -1.43
RAE1P78406 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.09□□□□□ -1.43
RAE1P78406 KATNBL1P5-201ENST00000605015 517 ntBASIC6.09□□□□□ -1.43
RAE1P78406 AC097504.2-201ENST00000608088 454 ntBASIC6.09□□□□□ -1.43
RAE1P78406 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.09□□□□□ -1.43
RAE1P78406 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.09□□□□□ -1.43
RAE1P78406 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RAE1P78406 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RAE1P78406 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.09□□□□□ -1.44
RAE1P78406 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RAE1P78406 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RAE1P78406 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RAE1P78406 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RAE1P78406 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.08□□□□□ -1.44
RAE1P78406 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
RAE1P78406 AL929601.4-201ENST00000613011 1341 ntBASIC6.08□□□□□ -1.44
RAE1P78406 GUCY1B2-204ENST00000531898 1979 ntBASIC6.08□□□□□ -1.44
RAE1P78406 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAE1P78406 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.08□□□□□ -1.44
RAE1P78406 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAE1P78406 RN7SKP257-201ENST00000364525 309 ntBASIC6.08□□□□□ -1.44
RAE1P78406 RNA5SP478-201ENST00000364657 115 ntBASIC6.08□□□□□ -1.44
RAE1P78406 SNORD51.1-201ENST00000365405 77 ntBASIC6.08□□□□□ -1.44
RAE1P78406 RNU6-609P-201ENST00000365459 107 ntBASIC6.08□□□□□ -1.44
RAE1P78406 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAE1P78406 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAE1P78406 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RAE1P78406 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.08□□□□□ -1.44
RAE1P78406 MTND4P11-201ENST00000417020 1058 ntBASIC6.08□□□□□ -1.44
RAE1P78406 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.08□□□□□ -1.44
RAE1P78406 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.08□□□□□ -1.44
RAE1P78406 ARAFP1-201ENST00000422172 605 ntBASIC6.08□□□□□ -1.44
RAE1P78406 AL157884.1-201ENST00000424561 454 ntBASIC6.08□□□□□ -1.44
RAE1P78406 NPM1P25-201ENST00000429734 854 ntBASIC6.08□□□□□ -1.44
RAE1P78406 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAE1P78406 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.08□□□□□ -1.44
RAE1P78406 GAPDHP37-201ENST00000442317 968 ntBASIC6.08□□□□□ -1.44
RAE1P78406 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.08□□□□□ -1.44
RAE1P78406 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.08□□□□□ -1.44
RAE1P78406 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.08□□□□□ -1.44
RAE1P78406 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.08□□□□□ -1.44
RAE1P78406 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.08□□□□□ -1.44
RAE1P78406 AC106800.3-201ENST00000511389 308 ntBASIC6.08□□□□□ -1.44
RAE1P78406 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.08□□□□□ -1.44
RAE1P78406 COX6B1P4-201ENST00000519826 484 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms