Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CIR1P2-201ENST00000514821 1342 ntBASIC7.15□□□□□ -1.26
CCNA1P78396 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCNA1P78396 RBMY1HP-201ENST00000382759 1389 ntBASIC7.15□□□□□ -1.26
CCNA1P78396 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.15□□□□□ -1.26
CCNA1P78396 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCNA1P78396 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.15□□□□□ -1.27
CCNA1P78396 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
CCNA1P78396 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
CCNA1P78396 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.15□□□□□ -1.27
CCNA1P78396 MAPK10-270ENST00000641102 3538 ntBASIC7.15□□□□□ -1.27
CCNA1P78396 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CCNA1P78396 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CCNA1P78396 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CCNA1P78396 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCNA1P78396 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
CCNA1P78396 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCNA1P78396 RNFT1P3-201ENST00000340898 1052 ntBASIC7.14□□□□□ -1.27
CCNA1P78396 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCNA1P78396 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCNA1P78396 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.14□□□□□ -1.27
CCNA1P78396 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.14□□□□□ -1.27
CCNA1P78396 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CCNA1P78396 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
CCNA1P78396 AC016769.2-201ENST00000414815 475 ntBASIC7.14□□□□□ -1.27
CCNA1P78396 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.14□□□□□ -1.27
CCNA1P78396 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCNA1P78396 AL035660.1-201ENST00000422041 222 ntBASIC7.14□□□□□ -1.27
CCNA1P78396 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.14□□□□□ -1.27
CCNA1P78396 VN1R38P-201ENST00000450265 887 ntBASIC7.14□□□□□ -1.27
CCNA1P78396 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.14□□□□□ -1.27
CCNA1P78396 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.14□□□□□ -1.27
CCNA1P78396 AC021269.1-201ENST00000526860 705 ntBASIC7.14□□□□□ -1.27
CCNA1P78396 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
CCNA1P78396 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.14□□□□□ -1.27
CCNA1P78396 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.14□□□□□ -1.27
CCNA1P78396 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.14□□□□□ -1.27
CCNA1P78396 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.14□□□□□ -1.27
CCNA1P78396 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.14□□□□□ -1.27
CCNA1P78396 NPIPB1P-202ENST00000588786 828 ntBASIC7.14□□□□□ -1.27
CCNA1P78396 AL513218.1-201ENST00000606527 391 ntBASIC7.14□□□□□ -1.27
CCNA1P78396 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.14□□□□□ -1.27
CCNA1P78396 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.14□□□□□ -1.27
CCNA1P78396 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.14□□□□□ -1.27
CCNA1P78396 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.14□□□□□ -1.27
CCNA1P78396 AC018659.2-201ENST00000624690 715 ntBASIC7.14□□□□□ -1.27
CCNA1P78396 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CCNA1P78396 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.14□□□□□ -1.27
CCNA1P78396 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.14□□□□□ -1.27
CCNA1P78396 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCNA1P78396 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCNA1P78396 AC107980.1-201ENST00000558671 3355 ntBASIC7.14□□□□□ -1.27
CCNA1P78396 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCNA1P78396 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.13□□□□□ -1.27
CCNA1P78396 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.13□□□□□ -1.27
CCNA1P78396 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.13□□□□□ -1.27
CCNA1P78396 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
CCNA1P78396 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CCNA1P78396 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.13□□□□□ -1.27
CCNA1P78396 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CCNA1P78396 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
CCNA1P78396 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCNA1P78396 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCNA1P78396 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCNA1P78396 OR2M1P-201ENST00000318104 951 ntBASIC7.13□□□□□ -1.27
CCNA1P78396 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CCNA1P78396 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCNA1P78396 NPM1P25-201ENST00000429734 854 ntBASIC7.13□□□□□ -1.27
CCNA1P78396 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.13□□□□□ -1.27
CCNA1P78396 MGAT2P1-201ENST00000449718 797 ntBASIC7.13□□□□□ -1.27
CCNA1P78396 BZW1P1-201ENST00000454901 1240 ntBASIC7.13□□□□□ -1.27
CCNA1P78396 VPS25P1-201ENST00000455691 508 ntBASIC7.13□□□□□ -1.27
CCNA1P78396 AC114781.3-201ENST00000512083 142 ntBASIC7.13□□□□□ -1.27
CCNA1P78396 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.13□□□□□ -1.27
CCNA1P78396 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.13□□□□□ -1.27
CCNA1P78396 AC009120.3-201ENST00000563335 499 ntBASIC7.13□□□□□ -1.27
CCNA1P78396 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.13□□□□□ -1.27
CCNA1P78396 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.13□□□□□ -1.27
CCNA1P78396 AL591167.1-201ENST00000607321 456 ntBASIC7.13□□□□□ -1.27
CCNA1P78396 AC022106.1-201ENST00000612834 766 ntBASIC7.13□□□□□ -1.27
CCNA1P78396 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.13□□□□□ -1.27
CCNA1P78396 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CCNA1P78396 AC096708.4-201ENST00000620563 552 ntBASIC7.13□□□□□ -1.27
CCNA1P78396 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CCNA1P78396 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCNA1P78396 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCNA1P78396 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCNA1P78396 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
CCNA1P78396 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCNA1P78396 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCNA1P78396 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCNA1P78396 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.13□□□□□ -1.27
CCNA1P78396 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CCNA1P78396 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCNA1P78396 AC015689.2-201ENST00000528172 1738 ntBASIC7.13□□□□□ -1.27
CCNA1P78396 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCNA1P78396 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNA1P78396 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNA1P78396 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.12□□□□□ -1.27
CCNA1P78396 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNA1P78396 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms