Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HIST1H3AP68431 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HIST1H3AP68431 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HIST1H3AP68431 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HIST1H3AP68431 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
HIST1H3AP68431 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HIST1H3AP68431 AL133243.2-201ENST00000610331 1621 ntBASIC5.44□□□□□ -1.54
HIST1H3AP68431 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HIST1H3AP68431 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HIST1H3AP68431 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HIST1H3AP68431 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HIST1H3AP68431 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AL121839.2-201ENST00000565058 6943 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HIST1H3AP68431 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HIST1H3AP68431 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HIST1H3AP68431 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HIST1H3AP68431 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC004656.1-201ENST00000568479 4951 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 RNA5SP346-201ENST00000363541 121 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 RNA5SP77-201ENST00000365394 120 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 PRELID1P1-201ENST00000403549 660 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC015977.1-201ENST00000418887 292 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC092601.1-201ENST00000444526 383 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 RPS18P1-201ENST00000447840 458 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 SNRPCP11-201ENST00000492453 205 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC008945.1-201ENST00000505144 499 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 MRPL57P6-201ENST00000506570 309 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC138517.1-201ENST00000515724 568 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 RN7SL66P-201ENST00000582099 264 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC020916.2-201ENST00000591242 360 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC011891.2-201ENST00000604949 397 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AL137067.2-201ENST00000621202 131 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HIST1H3AP68431 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HIST1H3AP68431 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HIST1H3AP68431 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HIST1H3AP68431 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.43□□□□□ -1.54
HIST1H3AP68431 AC024651.2-201ENST00000562480 2098 ntBASIC5.43□□□□□ -1.54
HIST1H3AP68431 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC063923.1-201ENST00000478982 1619 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 SNORA64.3-201ENST00000365647 134 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 AL139805.1-201ENST00000407837 289 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 MTND2P12-201ENST00000417560 1252 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC016027.5-201ENST00000427227 210 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 CXCR2P1-202ENST00000443392 1074 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms