Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.87□□□□□ -1.47
LIM2P55344 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.87□□□□□ -1.47
LIM2P55344 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
LIM2P55344 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.87□□□□□ -1.47
LIM2P55344 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
LIM2P55344 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
LIM2P55344 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
LIM2P55344 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LIM2P55344 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.87□□□□□ -1.47
LIM2P55344 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LIM2P55344 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LIM2P55344 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
LIM2P55344 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.86□□□□□ -1.47
LIM2P55344 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIM2P55344 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIM2P55344 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
LIM2P55344 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.86□□□□□ -1.47
LIM2P55344 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIM2P55344 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIM2P55344 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.86□□□□□ -1.47
LIM2P55344 AC024651.2-201ENST00000562480 2098 ntBASIC5.86□□□□□ -1.47
LIM2P55344 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
LIM2P55344 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LIM2P55344 AC018717.1-201ENST00000457712 1505 ntBASIC5.86□□□□□ -1.47
LIM2P55344 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
LIM2P55344 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LIM2P55344 RNA5SP279-201ENST00000365513 117 ntBASIC5.86□□□□□ -1.47
LIM2P55344 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIM2P55344 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LIM2P55344 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.86□□□□□ -1.47
LIM2P55344 RN7SKP108-201ENST00000411367 328 ntBASIC5.86□□□□□ -1.47
LIM2P55344 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.86□□□□□ -1.47
LIM2P55344 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.86□□□□□ -1.47
LIM2P55344 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIM2P55344 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.86□□□□□ -1.47
LIM2P55344 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.86□□□□□ -1.47
LIM2P55344 AC108479.1-201ENST00000431142 427 ntBASIC5.86□□□□□ -1.47
LIM2P55344 IGLV3-4-201ENST00000432300 244 ntBASIC5.86□□□□□ -1.47
LIM2P55344 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.86□□□□□ -1.47
LIM2P55344 RBMY2BP-202ENST00000451071 1156 ntBASIC5.86□□□□□ -1.47
LIM2P55344 AC073594.1-201ENST00000462065 364 ntBASIC5.86□□□□□ -1.47
LIM2P55344 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.86□□□□□ -1.47
LIM2P55344 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.86□□□□□ -1.47
LIM2P55344 AC108103.1-201ENST00000511286 446 ntBASIC5.86□□□□□ -1.47
LIM2P55344 RN7SKP183-201ENST00000517169 324 ntBASIC5.86□□□□□ -1.47
LIM2P55344 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.86□□□□□ -1.47
LIM2P55344 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.86□□□□□ -1.47
LIM2P55344 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.86□□□□□ -1.47
LIM2P55344 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.86□□□□□ -1.47
LIM2P55344 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.86□□□□□ -1.47
LIM2P55344 AP005136.2-201ENST00000583253 1049 ntBASIC5.86□□□□□ -1.47
LIM2P55344 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.86□□□□□ -1.47
LIM2P55344 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.86□□□□□ -1.47
LIM2P55344 AL109924.4-201ENST00000623089 670 ntBASIC5.86□□□□□ -1.47
LIM2P55344 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.86□□□□□ -1.47
LIM2P55344 AC003992.1-201ENST00000635364 557 ntBASIC5.86□□□□□ -1.47
LIM2P55344 AC111152.1-202ENST00000635848 339 ntBASIC5.86□□□□□ -1.47
LIM2P55344 AC116667.2-201ENST00000641075 823 ntBASIC5.86□□□□□ -1.47
LIM2P55344 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.86□□□□□ -1.47
LIM2P55344 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIM2P55344 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIM2P55344 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LIM2P55344 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.86□□□□□ -1.47
LIM2P55344 AP003486.1-201ENST00000525716 3994 ntBASIC5.86□□□□□ -1.47
LIM2P55344 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIM2P55344 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIM2P55344 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIM2P55344 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.86□□□□□ -1.47
LIM2P55344 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.85□□□□□ -1.47
LIM2P55344 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
LIM2P55344 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIM2P55344 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIM2P55344 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIM2P55344 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIM2P55344 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.85□□□□□ -1.47
LIM2P55344 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.85□□□□□ -1.47
LIM2P55344 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIM2P55344 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIM2P55344 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIM2P55344 CCNT2P1-201ENST00000423082 1315 ntBASIC5.85□□□□□ -1.47
LIM2P55344 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.85□□□□□ -1.47
LIM2P55344 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIM2P55344 RBBP4P5-201ENST00000398583 1266 ntBASIC5.85□□□□□ -1.47
LIM2P55344 PSMD10P2-201ENST00000432890 672 ntBASIC5.85□□□□□ -1.47
LIM2P55344 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.85□□□□□ -1.47
LIM2P55344 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.85□□□□□ -1.47
LIM2P55344 AP002453.1-201ENST00000492327 668 ntBASIC5.85□□□□□ -1.47
LIM2P55344 AC090958.1-201ENST00000511122 351 ntBASIC5.85□□□□□ -1.47
LIM2P55344 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.85□□□□□ -1.47
LIM2P55344 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.85□□□□□ -1.47
LIM2P55344 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.85□□□□□ -1.47
LIM2P55344 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.85□□□□□ -1.47
LIM2P55344 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.85□□□□□ -1.47
LIM2P55344 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.85□□□□□ -1.47
LIM2P55344 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.85□□□□□ -1.47
LIM2P55344 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.85□□□□□ -1.47
LIM2P55344 AL080312.2-201ENST00000613001 630 ntBASIC5.85□□□□□ -1.47
LIM2P55344 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.85□□□□□ -1.47
LIM2P55344 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIM2P55344 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms