Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CASP4P49662 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.7□□□□□ -1.34
CASP4P49662 TMCC1P1-201ENST00000518897 1980 ntBASIC6.7□□□□□ -1.34
CASP4P49662 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.7□□□□□ -1.34
CASP4P49662 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CASP4P49662 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
CASP4P49662 AC022325.1-201ENST00000502748 2199 ntBASIC6.7□□□□□ -1.34
CASP4P49662 RN7SKP86-201ENST00000410454 332 ntBASIC6.7□□□□□ -1.34
CASP4P49662 AL359885.1-201ENST00000415786 903 ntBASIC6.7□□□□□ -1.34
CASP4P49662 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.7□□□□□ -1.34
CASP4P49662 AC015977.1-201ENST00000418887 292 ntBASIC6.7□□□□□ -1.34
CASP4P49662 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.7□□□□□ -1.34
CASP4P49662 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CASP4P49662 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.7□□□□□ -1.34
CASP4P49662 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.7□□□□□ -1.34
CASP4P49662 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.7□□□□□ -1.34
CASP4P49662 AC007383.1-201ENST00000445875 636 ntBASIC6.7□□□□□ -1.34
CASP4P49662 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.7□□□□□ -1.34
CASP4P49662 AC253576.1-201ENST00000511645 1156 ntBASIC6.7□□□□□ -1.34
CASP4P49662 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.7□□□□□ -1.34
CASP4P49662 AC021269.1-201ENST00000526860 705 ntBASIC6.7□□□□□ -1.34
CASP4P49662 MRPS21P8-201ENST00000569196 235 ntBASIC6.7□□□□□ -1.34
CASP4P49662 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.7□□□□□ -1.34
CASP4P49662 MIR4701-201ENST00000583094 63 ntBASIC6.7□□□□□ -1.34
CASP4P49662 AP001823.1-201ENST00000604056 1003 ntBASIC6.7□□□□□ -1.34
CASP4P49662 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.7□□□□□ -1.34
CASP4P49662 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
CASP4P49662 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CASP4P49662 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CASP4P49662 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.7□□□□□ -1.34
CASP4P49662 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CASP4P49662 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CASP4P49662 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CASP4P49662 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.7□□□□□ -1.34
CASP4P49662 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
CASP4P49662 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CASP4P49662 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CASP4P49662 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.7□□□□□ -1.34
CASP4P49662 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.7□□□□□ -1.34
CASP4P49662 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
CASP4P49662 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CASP4P49662 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CASP4P49662 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CASP4P49662 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.69□□□□□ -1.34
CASP4P49662 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CASP4P49662 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.69□□□□□ -1.34
CASP4P49662 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
CASP4P49662 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CASP4P49662 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CASP4P49662 MIR1275-201ENST00000408770 80 ntBASIC6.69□□□□□ -1.34
CASP4P49662 RPS21P8-201ENST00000413365 247 ntBASIC6.69□□□□□ -1.34
CASP4P49662 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.69□□□□□ -1.34
CASP4P49662 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.69□□□□□ -1.34
CASP4P49662 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.69□□□□□ -1.34
CASP4P49662 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.69□□□□□ -1.34
CASP4P49662 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.69□□□□□ -1.34
CASP4P49662 EEF1B2P3-201ENST00000447718 678 ntBASIC6.69□□□□□ -1.34
CASP4P49662 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.69□□□□□ -1.34
CASP4P49662 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CASP4P49662 RN7SL362P-201ENST00000494228 267 ntBASIC6.69□□□□□ -1.34
CASP4P49662 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.69□□□□□ -1.34
CASP4P49662 AC018797.1-201ENST00000510791 255 ntBASIC6.69□□□□□ -1.34
CASP4P49662 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.69□□□□□ -1.34
CASP4P49662 RN7SL230P-201ENST00000580835 303 ntBASIC6.69□□□□□ -1.34
CASP4P49662 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.69□□□□□ -1.34
CASP4P49662 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.69□□□□□ -1.34
CASP4P49662 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.69□□□□□ -1.34
CASP4P49662 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.69□□□□□ -1.34
CASP4P49662 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.69□□□□□ -1.34
CASP4P49662 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.69□□□□□ -1.34
CASP4P49662 RFPL4AP6-201ENST00000616792 846 ntBASIC6.69□□□□□ -1.34
CASP4P49662 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.69□□□□□ -1.34
CASP4P49662 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.69□□□□□ -1.34
CASP4P49662 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.69□□□□□ -1.34
CASP4P49662 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CASP4P49662 AL662795.2-201ENST00000624252 3706 ntBASIC6.69□□□□□ -1.34
CASP4P49662 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CASP4P49662 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.69□□□□□ -1.34
CASP4P49662 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CASP4P49662 AC009135.2-201ENST00000624136 1768 ntBASIC6.69□□□□□ -1.34
CASP4P49662 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.69□□□□□ -1.34
CASP4P49662 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.69□□□□□ -1.34
CASP4P49662 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CASP4P49662 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CASP4P49662 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CASP4P49662 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
CASP4P49662 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CASP4P49662 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
CASP4P49662 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CASP4P49662 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.68□□□□□ -1.34
CASP4P49662 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.68□□□□□ -1.34
CASP4P49662 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
CASP4P49662 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.68□□□□□ -1.34
CASP4P49662 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.68□□□□□ -1.34
CASP4P49662 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CASP4P49662 RN7SKP144-201ENST00000411108 279 ntBASIC6.68□□□□□ -1.34
CASP4P49662 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.68□□□□□ -1.34
CASP4P49662 RPSAP65-201ENST00000429660 595 ntBASIC6.68□□□□□ -1.34
CASP4P49662 BMP6P1-201ENST00000431230 679 ntBASIC6.68□□□□□ -1.34
CASP4P49662 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms