Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC130360.2-201ENST00000533477 1556 ntBASIC7.87□□□□□ -1.15
COL15A1P39059 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.87□□□□□ -1.15
COL15A1P39059 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL15A1P39059 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
COL15A1P39059 OR13C1P-202ENST00000641378 2919 ntBASIC7.87□□□□□ -1.15
COL15A1P39059 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL15A1P39059 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL15A1P39059 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL15A1P39059 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
COL15A1P39059 RPL35AP31-201ENST00000418340 337 ntBASIC7.86□□□□□ -1.15
COL15A1P39059 BX323845.3-201ENST00000428215 527 ntBASIC7.86□□□□□ -1.15
COL15A1P39059 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.86□□□□□ -1.15
COL15A1P39059 ARL4AP4-201ENST00000434170 518 ntBASIC7.86□□□□□ -1.15
COL15A1P39059 DNAJC19P5-201ENST00000443295 316 ntBASIC7.86□□□□□ -1.15
COL15A1P39059 AC096754.1-201ENST00000508904 818 ntBASIC7.86□□□□□ -1.15
COL15A1P39059 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.86□□□□□ -1.15
COL15A1P39059 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.86□□□□□ -1.15
COL15A1P39059 RNA5SP362-201ENST00000516048 118 ntBASIC7.86□□□□□ -1.15
COL15A1P39059 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.86□□□□□ -1.15
COL15A1P39059 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.86□□□□□ -1.15
COL15A1P39059 AC022784.5-201ENST00000522241 437 ntBASIC7.86□□□□□ -1.15
COL15A1P39059 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.86□□□□□ -1.15
COL15A1P39059 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.86□□□□□ -1.15
COL15A1P39059 AC051619.2-201ENST00000559063 397 ntBASIC7.86□□□□□ -1.15
COL15A1P39059 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.86□□□□□ -1.15
COL15A1P39059 ZNF322P1-201ENST00000568013 1209 ntBASIC7.86□□□□□ -1.15
COL15A1P39059 MIR3189-201ENST00000578735 73 ntBASIC7.86□□□□□ -1.15
COL15A1P39059 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.86□□□□□ -1.15
COL15A1P39059 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.86□□□□□ -1.15
COL15A1P39059 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.86□□□□□ -1.15
COL15A1P39059 AL049767.1-202ENST00000637826 242 ntBASIC7.86□□□□□ -1.15
COL15A1P39059 MTCO1P46-201ENST00000451639 1491 ntBASIC7.86□□□□□ -1.15
COL15A1P39059 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL15A1P39059 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL15A1P39059 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL15A1P39059 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL15A1P39059 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL15A1P39059 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL15A1P39059 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.86□□□□□ -1.15
COL15A1P39059 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.86□□□□□ -1.15
COL15A1P39059 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.86□□□□□ -1.15
COL15A1P39059 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.86□□□□□ -1.15
COL15A1P39059 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.86□□□□□ -1.15
COL15A1P39059 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL15A1P39059 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
COL15A1P39059 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.85□□□□□ -1.15
COL15A1P39059 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL15A1P39059 RNA5SP333-201ENST00000363466 118 ntBASIC7.85□□□□□ -1.15
COL15A1P39059 RNA5SP334-201ENST00000364825 118 ntBASIC7.85□□□□□ -1.15
COL15A1P39059 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.85□□□□□ -1.15
COL15A1P39059 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL15A1P39059 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL15A1P39059 BRWD1P3-201ENST00000428816 390 ntBASIC7.85□□□□□ -1.15
COL15A1P39059 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.85□□□□□ -1.15
COL15A1P39059 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.85□□□□□ -1.15
COL15A1P39059 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
COL15A1P39059 AL512637.1-201ENST00000439523 1231 ntBASIC7.85□□□□□ -1.15
COL15A1P39059 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.85□□□□□ -1.15
COL15A1P39059 AC124945.1-201ENST00000485133 188 ntBASIC7.85□□□□□ -1.15
COL15A1P39059 AC008945.1-201ENST00000505144 499 ntBASIC7.85□□□□□ -1.15
COL15A1P39059 SETP21-201ENST00000514799 892 ntBASIC7.85□□□□□ -1.15
COL15A1P39059 RPA2P3-201ENST00000533268 770 ntBASIC7.85□□□□□ -1.15
COL15A1P39059 MTATP6P25-201ENST00000574491 261 ntBASIC7.85□□□□□ -1.15
COL15A1P39059 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL15A1P39059 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.85□□□□□ -1.15
COL15A1P39059 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.85□□□□□ -1.15
COL15A1P39059 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
COL15A1P39059 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL15A1P39059 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL15A1P39059 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL15A1P39059 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
COL15A1P39059 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.85□□□□□ -1.15
COL15A1P39059 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.85□□□□□ -1.15
COL15A1P39059 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
COL15A1P39059 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL15A1P39059 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL15A1P39059 AC027279.1-201ENST00000568885 4284 ntBASIC7.85□□□□□ -1.15
COL15A1P39059 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
COL15A1P39059 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL15A1P39059 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL15A1P39059 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
COL15A1P39059 AC104162.1-201ENST00000430831 2382 ntBASIC7.85□□□□□ -1.15
COL15A1P39059 AL031123.3-201ENST00000623345 1837 ntBASIC7.85□□□□□ -1.15
COL15A1P39059 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL15A1P39059 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL15A1P39059 FAM32BP-201ENST00000344033 333 ntBASIC7.84□□□□□ -1.15
COL15A1P39059 AL035660.1-201ENST00000422041 222 ntBASIC7.84□□□□□ -1.15
COL15A1P39059 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.84□□□□□ -1.15
COL15A1P39059 TPTE2P1-204ENST00000435256 593 ntBASIC7.84□□□□□ -1.15
COL15A1P39059 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.84□□□□□ -1.15
COL15A1P39059 VN1R110P-201ENST00000438988 971 ntBASIC7.84□□□□□ -1.15
COL15A1P39059 AC016908.1-201ENST00000442571 1219 ntBASIC7.84□□□□□ -1.15
COL15A1P39059 ZNF619P1-201ENST00000446539 752 ntBASIC7.84□□□□□ -1.15
COL15A1P39059 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.84□□□□□ -1.15
COL15A1P39059 AL445665.1-202ENST00000452436 324 ntBASIC7.84□□□□□ -1.15
COL15A1P39059 RPSAP39-201ENST00000467439 883 ntBASIC7.84□□□□□ -1.15
COL15A1P39059 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.84□□□□□ -1.15
COL15A1P39059 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.84□□□□□ -1.15
COL15A1P39059 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.84□□□□□ -1.15
COL15A1P39059 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms