Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CPS1P31327 AC110597.1-201ENST00000562669 3176 ntBASIC8.62□□□□□ -1.03
CPS1P31327 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CPS1P31327 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CPS1P31327 RNA5SP183-201ENST00000362452 119 ntBASIC8.62□□□□□ -1.03
CPS1P31327 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CPS1P31327 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC8.62□□□□□ -1.03
CPS1P31327 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC8.62□□□□□ -1.03
CPS1P31327 AC012075.1-201ENST00000436549 580 ntBASIC8.62□□□□□ -1.03
CPS1P31327 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.62□□□□□ -1.03
CPS1P31327 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.62□□□□□ -1.03
CPS1P31327 AP000676.2-201ENST00000529711 301 ntBASIC8.62□□□□□ -1.03
CPS1P31327 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.62□□□□□ -1.03
CPS1P31327 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC8.62□□□□□ -1.03
CPS1P31327 AC004825.1-201ENST00000555068 586 ntBASIC8.62□□□□□ -1.03
CPS1P31327 MIR4697-201ENST00000582977 78 ntBASIC8.62□□□□□ -1.03
CPS1P31327 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC8.62□□□□□ -1.03
CPS1P31327 OR7A1P-202ENST00000641542 1158 ntBASIC8.62□□□□□ -1.03
CPS1P31327 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CPS1P31327 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
CPS1P31327 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CPS1P31327 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CPS1P31327 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC8.62□□□□□ -1.03
CPS1P31327 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CPS1P31327 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC8.62□□□□□ -1.03
CPS1P31327 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CPS1P31327 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CPS1P31327 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CPS1P31327 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC8.61□□□□□ -1.03
CPS1P31327 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CPS1P31327 PDZK1P1-202ENST00000425209 1350 ntBASIC8.61□□□□□ -1.03
CPS1P31327 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.61□□□□□ -1.03
CPS1P31327 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CPS1P31327 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC8.61□□□□□ -1.03
CPS1P31327 AL590762.4-201ENST00000425885 253 ntBASIC8.61□□□□□ -1.03
CPS1P31327 AL662874.1-201ENST00000426065 230 ntBASIC8.61□□□□□ -1.03
CPS1P31327 VN1R54P-201ENST00000435210 1049 ntBASIC8.61□□□□□ -1.03
CPS1P31327 AZGP1P2-201ENST00000454506 345 ntBASIC8.61□□□□□ -1.03
CPS1P31327 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC8.61□□□□□ -1.03
CPS1P31327 RN7SKP66-201ENST00000516681 231 ntBASIC8.61□□□□□ -1.03
CPS1P31327 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
CPS1P31327 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC8.61□□□□□ -1.03
CPS1P31327 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC8.61□□□□□ -1.03
CPS1P31327 IGLCOR22-2-201ENST00000605398 313 ntBASIC8.61□□□□□ -1.03
CPS1P31327 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CPS1P31327 CTNNA1P1-201ENST00000515849 2728 ntBASIC8.61□□□□□ -1.03
CPS1P31327 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CPS1P31327 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CPS1P31327 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CPS1P31327 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CPS1P31327 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CPS1P31327 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CPS1P31327 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CPS1P31327 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC8.61□□□□□ -1.03
CPS1P31327 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CPS1P31327 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
CPS1P31327 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CPS1P31327 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CPS1P31327 AC127024.8-201ENST00000623719 2094 ntBASIC8.6□□□□□ -1.03
CPS1P31327 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CPS1P31327 RNA5SP333-201ENST00000363466 118 ntBASIC8.6□□□□□ -1.03
CPS1P31327 RNA5SP334-201ENST00000364825 118 ntBASIC8.6□□□□□ -1.03
CPS1P31327 AC016739.1-201ENST00000405359 345 ntBASIC8.6□□□□□ -1.03
CPS1P31327 AL139128.1-201ENST00000413921 941 ntBASIC8.6□□□□□ -1.03
CPS1P31327 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC8.6□□□□□ -1.03
CPS1P31327 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC8.6□□□□□ -1.03
CPS1P31327 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.6□□□□□ -1.03
CPS1P31327 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC8.6□□□□□ -1.03
CPS1P31327 AC093267.1-201ENST00000489176 961 ntBASIC8.6□□□□□ -1.03
CPS1P31327 RN7SL547P-201ENST00000490793 290 ntBASIC8.6□□□□□ -1.03
CPS1P31327 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC8.6□□□□□ -1.03
CPS1P31327 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC8.6□□□□□ -1.03
CPS1P31327 CDC42P3-201ENST00000518493 633 ntBASIC8.6□□□□□ -1.03
CPS1P31327 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
CPS1P31327 AC092865.1-201ENST00000544395 1023 ntBASIC8.6□□□□□ -1.03
CPS1P31327 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CPS1P31327 AL023806.3-201ENST00000638502 2704 ntBASIC8.6□□□□□ -1.03
CPS1P31327 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
CPS1P31327 AC092111.1-201ENST00000618256 3358 ntBASIC8.6□□□□□ -1.03
CPS1P31327 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CPS1P31327 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.6□□□□□ -1.03
CPS1P31327 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CPS1P31327 AC025809.2-201ENST00000625085 1802 ntBASIC8.6□□□□□ -1.03
CPS1P31327 BIN2P1-201ENST00000504996 1530 ntBASIC8.6□□□□□ -1.03
CPS1P31327 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
CPS1P31327 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
CPS1P31327 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CPS1P31327 AC022905.1-201ENST00000503430 3048 ntBASIC8.59□□□□□ -1.03
CPS1P31327 RNA5SP234-201ENST00000363916 119 ntBASIC8.59□□□□□ -1.03
CPS1P31327 MIR141-201ENST00000384975 95 ntBASIC8.59□□□□□ -1.03
CPS1P31327 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC8.59□□□□□ -1.03
CPS1P31327 AC016027.4-201ENST00000450866 277 ntBASIC8.59□□□□□ -1.03
CPS1P31327 HIGD1AP8-201ENST00000453927 274 ntBASIC8.59□□□□□ -1.03
CPS1P31327 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC8.59□□□□□ -1.03
CPS1P31327 AC147055.3-201ENST00000510547 851 ntBASIC8.59□□□□□ -1.03
CPS1P31327 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC8.59□□□□□ -1.03
CPS1P31327 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC8.59□□□□□ -1.03
CPS1P31327 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC8.59□□□□□ -1.03
CPS1P31327 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.59□□□□□ -1.03
CPS1P31327 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms