Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL8A2P25067 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL8A2P25067 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.25□□□□□ -1.57
COL8A2P25067 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL8A2P25067 RN7SKP275-201ENST00000364626 301 ntBASIC5.25□□□□□ -1.57
COL8A2P25067 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL8A2P25067 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.25□□□□□ -1.57
COL8A2P25067 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.25□□□□□ -1.57
COL8A2P25067 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.25□□□□□ -1.57
COL8A2P25067 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
COL8A2P25067 AL353662.1-201ENST00000439099 327 ntBASIC5.25□□□□□ -1.57
COL8A2P25067 DNAJA1P5-201ENST00000440278 943 ntBASIC5.25□□□□□ -1.57
COL8A2P25067 ATP5LP2-201ENST00000440646 311 ntBASIC5.25□□□□□ -1.57
COL8A2P25067 AC097463.1-201ENST00000447288 481 ntBASIC5.25□□□□□ -1.57
COL8A2P25067 AC092967.1-201ENST00000449016 481 ntBASIC5.25□□□□□ -1.57
COL8A2P25067 AL358876.1-201ENST00000453364 1075 ntBASIC5.25□□□□□ -1.57
COL8A2P25067 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.25□□□□□ -1.57
COL8A2P25067 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.25□□□□□ -1.57
COL8A2P25067 AP001858.2-201ENST00000536213 601 ntBASIC5.25□□□□□ -1.57
COL8A2P25067 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.25□□□□□ -1.57
COL8A2P25067 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.25□□□□□ -1.57
COL8A2P25067 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL8A2P25067 AC018558.5-201ENST00000565840 952 ntBASIC5.25□□□□□ -1.57
COL8A2P25067 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.25□□□□□ -1.57
COL8A2P25067 AC008507.3-201ENST00000585753 472 ntBASIC5.25□□□□□ -1.57
COL8A2P25067 AL683813.2-201ENST00000605245 502 ntBASIC5.25□□□□□ -1.57
COL8A2P25067 AC015982.1-201ENST00000608113 465 ntBASIC5.25□□□□□ -1.57
COL8A2P25067 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.25□□□□□ -1.57
COL8A2P25067 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL8A2P25067 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.25□□□□□ -1.57
COL8A2P25067 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL8A2P25067 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL8A2P25067 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.25□□□□□ -1.57
COL8A2P25067 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
COL8A2P25067 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.25□□□□□ -1.57
COL8A2P25067 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
COL8A2P25067 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.24□□□□□ -1.57
COL8A2P25067 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
COL8A2P25067 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A2P25067 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.24□□□□□ -1.57
COL8A2P25067 PARP4P1-201ENST00000435945 2337 ntBASIC5.24□□□□□ -1.57
COL8A2P25067 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A2P25067 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.24□□□□□ -1.57
COL8A2P25067 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A2P25067 AL662795.2-201ENST00000624252 3706 ntBASIC5.24□□□□□ -1.57
COL8A2P25067 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COL8A2P25067 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.24□□□□□ -1.57
COL8A2P25067 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A2P25067 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A2P25067 RNU1-134P-201ENST00000362935 165 ntBASIC5.24□□□□□ -1.57
COL8A2P25067 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.24□□□□□ -1.57
COL8A2P25067 MIR130B-202ENST00000385018 82 ntBASIC5.24□□□□□ -1.57
COL8A2P25067 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A2P25067 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.24□□□□□ -1.57
COL8A2P25067 AC097721.1-201ENST00000427150 1253 ntBASIC5.24□□□□□ -1.57
COL8A2P25067 AC079807.1-201ENST00000429993 481 ntBASIC5.24□□□□□ -1.57
COL8A2P25067 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.24□□□□□ -1.57
COL8A2P25067 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.24□□□□□ -1.57
COL8A2P25067 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.24□□□□□ -1.57
COL8A2P25067 AC144530.1-201ENST00000452862 555 ntBASIC5.24□□□□□ -1.57
COL8A2P25067 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.24□□□□□ -1.57
COL8A2P25067 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
COL8A2P25067 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A2P25067 AC079905.1-201ENST00000549280 475 ntBASIC5.24□□□□□ -1.57
COL8A2P25067 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.24□□□□□ -1.57
COL8A2P25067 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.24□□□□□ -1.57
COL8A2P25067 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.24□□□□□ -1.57
COL8A2P25067 CYCSP38-201ENST00000559840 322 ntBASIC5.24□□□□□ -1.57
COL8A2P25067 MIR4310-201ENST00000582950 57 ntBASIC5.24□□□□□ -1.57
COL8A2P25067 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.24□□□□□ -1.57
COL8A2P25067 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.24□□□□□ -1.57
COL8A2P25067 AL512652.1-201ENST00000619006 500 ntBASIC5.24□□□□□ -1.57
COL8A2P25067 AP001885.1-201ENST00000621658 558 ntBASIC5.24□□□□□ -1.57
COL8A2P25067 AC022400.9-201ENST00000623633 273 ntBASIC5.24□□□□□ -1.57
COL8A2P25067 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL8A2P25067 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
COL8A2P25067 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A2P25067 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A2P25067 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.24□□□□□ -1.57
COL8A2P25067 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A2P25067 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.24□□□□□ -1.57
COL8A2P25067 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A2P25067 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COL8A2P25067 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A2P25067 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
COL8A2P25067 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
COL8A2P25067 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A2P25067 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL8A2P25067 MAPK10-287ENST00000641217 3037 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.23□□□□□ -1.57
COL8A2P25067 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
COL8A2P25067 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.23□□□□□ -1.57
COL8A2P25067 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL8A2P25067 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL8A2P25067 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.23□□□□□ -1.57
COL8A2P25067 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL8A2P25067 SNORA21-201ENST00000362423 132 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 RN7SKP15-201ENST00000364742 309 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.23□□□□□ -1.57
COL8A2P25067 LCN1P2-201ENST00000372030 223 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms