Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VAMP1P23763 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC6.73□□□□□ -1.33
VAMP1P23763 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VAMP1P23763 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VAMP1P23763 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VAMP1P23763 OR8J3-201ENST00000301529 948 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
VAMP1P23763 RNU5F-7P-201ENST00000363696 115 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VAMP1P23763 NR1I3-206ENST00000367984 1059 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VAMP1P23763 INIP-201ENST00000374234 713 ntTSL 2 BASIC6.73□□□□□ -1.33
VAMP1P23763 SNORD116-4-201ENST00000384733 96 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 MIR629-201ENST00000385230 97 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 TPM3P6-201ENST00000391998 742 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.73□□□□□ -1.33
VAMP1P23763 COX6A1P3-201ENST00000404167 293 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 MTCO3P31-201ENST00000405526 789 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC068533.2-201ENST00000411872 306 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC6.73□□□□□ -1.33
VAMP1P23763 RPL7P8-201ENST00000411964 730 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.73□□□□□ -1.33
VAMP1P23763 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC6.73□□□□□ -1.33
VAMP1P23763 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC6.73□□□□□ -1.33
VAMP1P23763 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC6.73□□□□□ -1.33
VAMP1P23763 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.73□□□□□ -1.33
VAMP1P23763 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.73□□□□□ -1.33
VAMP1P23763 AL589823.1-201ENST00000429577 183 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC132217.1-201ENST00000430034 373 ntTSL 3 BASIC6.73□□□□□ -1.33
VAMP1P23763 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.73□□□□□ -1.33
VAMP1P23763 DSCR10-201ENST00000432141 860 ntTSL 3 BASIC6.73□□□□□ -1.33
VAMP1P23763 ANKRD54P1-201ENST00000433115 471 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC010881.1-201ENST00000433830 235 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 KCTD10P1-201ENST00000434203 625 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC6.73□□□□□ -1.33
VAMP1P23763 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.73□□□□□ -1.33
VAMP1P23763 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VAMP1P23763 SLC8A1-AS1-206ENST00000439606 565 ntTSL 4 BASIC6.73□□□□□ -1.33
VAMP1P23763 AC007652.1-201ENST00000441150 562 ntTSL 4 BASIC6.73□□□□□ -1.33
VAMP1P23763 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.73□□□□□ -1.33
VAMP1P23763 UBQLN4P2-201ENST00000446233 948 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AL672138.1-201ENST00000450604 1015 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC6.73□□□□□ -1.33
VAMP1P23763 RFC3P1-201ENST00000454568 682 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AL445673.1-201ENST00000455124 416 ntTSL 3 BASIC6.73□□□□□ -1.33
VAMP1P23763 AP001464.1-201ENST00000457565 323 ntTSL 5 BASIC6.73□□□□□ -1.33
VAMP1P23763 AL391825.1-202ENST00000458136 741 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 WWTR1-IT1-201ENST00000463167 451 ntTSL 5 BASIC6.73□□□□□ -1.33
VAMP1P23763 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.73□□□□□ -1.33
VAMP1P23763 AP000805.1-201ENST00000471604 784 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC104689.1-201ENST00000473356 768 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC004917.1-202ENST00000475791 760 ntTSL 3 BASIC6.73□□□□□ -1.33
VAMP1P23763 AL928654.1-201ENST00000476081 354 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 RPL7P38-201ENST00000488396 739 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 UBA52P3-201ENST00000491303 382 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 FAM177A1P1-201ENST00000503598 473 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 RAB5CP2-201ENST00000505368 637 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC010424.1-201ENST00000506336 297 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.73□□□□□ -1.33
VAMP1P23763 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VAMP1P23763 HSPE1P23-201ENST00000509838 286 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
VAMP1P23763 AC112192.1-201ENST00000515086 553 ntTSL 4 BASIC6.73□□□□□ -1.33
VAMP1P23763 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC6.73□□□□□ -1.33
VAMP1P23763 IGHVII-78-1-201ENST00000521105 269 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 MED30-204ENST00000522839 476 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VAMP1P23763 HIGD1AP10-201ENST00000527837 282 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC007115.1-201ENST00000546853 234 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC009779.4-201ENST00000554248 611 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.73□□□□□ -1.33
VAMP1P23763 AC055876.4-201ENST00000562515 712 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VAMP1P23763 AC090774.3-201ENST00000578666 742 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VAMP1P23763 G6PC-204ENST00000592383 987 ntTSL 2 BASIC6.73□□□□□ -1.33
VAMP1P23763 VN1R92P-201ENST00000598511 928 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.73□□□□□ -1.33
VAMP1P23763 AP001981.2-201ENST00000603241 418 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC083899.3-201ENST00000603413 594 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC123786.2-201ENST00000603459 275 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC007161.2-201ENST00000604734 1109 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 uc_338.2-201ENST00000612963 182 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AL133243.1-201ENST00000614487 366 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC079228.1-201ENST00000624774 1049 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AL121594.6-201ENST00000633440 261 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.73□□□□□ -1.33
VAMP1P23763 RDM1-229ENST00000639942 420 ntTSL 5 BASIC6.73□□□□□ -1.33
VAMP1P23763 AC099063.3-201ENST00000642066 185 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VAMP1P23763 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VAMP1P23763 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VAMP1P23763 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
VAMP1P23763 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC6.73□□□□□ -1.33
VAMP1P23763 AL031651.1-201ENST00000615357 1438 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.73□□□□□ -1.33
VAMP1P23763 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
VAMP1P23763 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.73□□□□□ -1.33
VAMP1P23763 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
VAMP1P23763 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
VAMP1P23763 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.73□□□□□ -1.33
VAMP1P23763 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms