Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RPL41P2-201ENST00000544920 409 ntBASIC6.27□□□□□ -1.41
CDH3P22223 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH3P22223 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH3P22223 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.27□□□□□ -1.41
CDH3P22223 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH3P22223 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH3P22223 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH3P22223 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH3P22223 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CDH3P22223 AL078623.1-201ENST00000602702 907 ntBASIC6.27□□□□□ -1.41
CDH3P22223 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH3P22223 AC005393.1-201ENST00000617916 584 ntBASIC6.27□□□□□ -1.41
CDH3P22223 AP001264.1-201ENST00000620602 703 ntBASIC6.27□□□□□ -1.41
CDH3P22223 AC012653.2-201ENST00000621880 420 ntBASIC6.27□□□□□ -1.41
CDH3P22223 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH3P22223 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH3P22223 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CDH3P22223 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH3P22223 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CDH3P22223 MSL3P1-202ENST00000440028 1468 ntBASIC6.27□□□□□ -1.41
CDH3P22223 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH3P22223 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CDH3P22223 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH3P22223 AP002512.4-202ENST00000641599 4530 ntBASIC6.26□□□□□ -1.41
CDH3P22223 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH3P22223 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH3P22223 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH3P22223 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CDH3P22223 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH3P22223 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CDH3P22223 RN7SKP171-201ENST00000364417 303 ntBASIC6.26□□□□□ -1.41
CDH3P22223 TRAV35-201ENST00000390462 330 ntBASIC6.26□□□□□ -1.41
CDH3P22223 RNU2-18P-201ENST00000411224 162 ntBASIC6.26□□□□□ -1.41
CDH3P22223 RPL7AP14-201ENST00000424041 802 ntBASIC6.26□□□□□ -1.41
CDH3P22223 AC003989.1-201ENST00000434569 565 ntBASIC6.26□□□□□ -1.41
CDH3P22223 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH3P22223 SNRPCP3-201ENST00000474888 476 ntBASIC6.26□□□□□ -1.41
CDH3P22223 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH3P22223 AC022206.1-201ENST00000495947 347 ntBASIC6.26□□□□□ -1.41
CDH3P22223 AC018645.1-201ENST00000505003 109 ntBASIC6.26□□□□□ -1.41
CDH3P22223 AC113367.2-201ENST00000505749 160 ntBASIC6.26□□□□□ -1.41
CDH3P22223 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH3P22223 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH3P22223 IGHV3-57-201ENST00000520143 280 ntBASIC6.26□□□□□ -1.41
CDH3P22223 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH3P22223 OR52K3P-201ENST00000531655 943 ntBASIC6.26□□□□□ -1.41
CDH3P22223 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.26□□□□□ -1.41
CDH3P22223 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH3P22223 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH3P22223 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH3P22223 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH3P22223 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH3P22223 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH3P22223 AL589863.1-201ENST00000595383 631 ntBASIC6.26□□□□□ -1.41
CDH3P22223 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH3P22223 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH3P22223 MRPL57P1-201ENST00000621486 265 ntBASIC6.26□□□□□ -1.41
CDH3P22223 AC087821.1-201ENST00000623639 567 ntBASIC6.26□□□□□ -1.41
CDH3P22223 AC010325.3-201ENST00000641084 394 ntBASIC6.26□□□□□ -1.41
CDH3P22223 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.26□□□□□ -1.41
CDH3P22223 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH3P22223 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH3P22223 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CDH3P22223 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH3P22223 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH3P22223 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH3P22223 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CDH3P22223 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH3P22223 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.26□□□□□ -1.41
CDH3P22223 AC027279.4-201ENST00000624371 2072 ntBASIC6.26□□□□□ -1.41
CDH3P22223 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH3P22223 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.25□□□□□ -1.41
CDH3P22223 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CDH3P22223 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH3P22223 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CDH3P22223 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH3P22223 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH3P22223 LINC01613-201ENST00000561476 2780 ntBASIC6.25□□□□□ -1.41
CDH3P22223 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
CDH3P22223 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH3P22223 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.25□□□□□ -1.41
CDH3P22223 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH3P22223 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH3P22223 RNA5SP232-201ENST00000364144 119 ntBASIC6.25□□□□□ -1.41
CDH3P22223 RNA5SP77-201ENST00000365394 120 ntBASIC6.25□□□□□ -1.41
CDH3P22223 RNU11-201ENST00000387069 134 ntBASIC6.25□□□□□ -1.41
CDH3P22223 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CDH3P22223 AC003045.1-201ENST00000398779 713 ntBASIC6.25□□□□□ -1.41
CDH3P22223 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH3P22223 AC083862.1-201ENST00000427378 1242 ntBASIC6.25□□□□□ -1.41
CDH3P22223 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH3P22223 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH3P22223 TIMM8BP2-201ENST00000445940 251 ntBASIC6.25□□□□□ -1.41
CDH3P22223 EEF1B2P3-201ENST00000447718 678 ntBASIC6.25□□□□□ -1.41
CDH3P22223 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH3P22223 MGAT2P1-201ENST00000449718 797 ntBASIC6.25□□□□□ -1.41
CDH3P22223 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH3P22223 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH3P22223 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH3P22223 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms