Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC8.18□□□□□ -1.1
ERCC3P19447 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
ERCC3P19447 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
ERCC3P19447 MGAT2P1-201ENST00000449718 797 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC8.18□□□□□ -1.1
ERCC3P19447 UOX-201ENST00000471089 899 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 AC093719.1-201ENST00000480427 441 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 RPL5P33-201ENST00000487833 905 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 AL117692.1-201ENST00000494283 713 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 RPL21P131-201ENST00000497298 483 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 RNU6-1308P-201ENST00000516817 103 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC8.18□□□□□ -1.1
ERCC3P19447 RPL10P18-201ENST00000519384 309 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.18□□□□□ -1.1
ERCC3P19447 AC079064.1-201ENST00000528365 362 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC8.18□□□□□ -1.1
ERCC3P19447 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
ERCC3P19447 TDGP1-201ENST00000543961 1229 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 AL132640.1-201ENST00000559594 619 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 EIF4A3P1-201ENST00000578499 647 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 AC015801.1-201ENST00000585651 153 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 AP001357.1-201ENST00000586304 1053 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 AC036176.3-201ENST00000602456 418 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 AC114878.2-201ENST00000604863 1251 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 AL137000.1-201ENST00000610528 1244 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
ERCC3P19447 AC005899.7-201ENST00000618199 588 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC8.18□□□□□ -1.1
ERCC3P19447 AC091304.6-201ENST00000619761 202 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ERCC3P19447 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
ERCC3P19447 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
ERCC3P19447 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
ERCC3P19447 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ERCC3P19447 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ERCC3P19447 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ERCC3P19447 CASC19-243ENST00000641588 1546 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ERCC3P19447 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
ERCC3P19447 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.17□□□□□ -1.1
ERCC3P19447 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ERCC3P19447 AC009237.3-203ENST00000442128 3551 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 PRNCR1-201ENST00000635449 12727 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
ERCC3P19447 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.17□□□□□ -1.1
ERCC3P19447 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC8.17□□□□□ -1.1
ERCC3P19447 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC8.17□□□□□ -1.1
ERCC3P19447 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.17□□□□□ -1.1
ERCC3P19447 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ERCC3P19447 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ERCC3P19447 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC8.17□□□□□ -1.1
ERCC3P19447 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC8.17□□□□□ -1.1
ERCC3P19447 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ERCC3P19447 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ERCC3P19447 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.17□□□□□ -1.1
ERCC3P19447 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
ERCC3P19447 RPL24P4-201ENST00000326586 421 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ERCC3P19447 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ERCC3P19447 RNU6-1055P-201ENST00000391085 107 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 RN7SKP146-201ENST00000410242 334 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC8.17□□□□□ -1.1
ERCC3P19447 RPL24P2-201ENST00000421023 475 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 AL022100.1-202ENST00000421214 548 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 PTPN2P1-201ENST00000423212 1072 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 CHCHD3P1-201ENST00000425516 676 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 RPL5P6-201ENST00000425640 886 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 GAPDHP51-201ENST00000426454 1000 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 FO393419.3-201ENST00000428741 282 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 FGF12-202ENST00000430714 603 ntTSL 2 BASIC8.17□□□□□ -1.1
ERCC3P19447 AL035458.1-201ENST00000433096 585 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ERCC3P19447 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC8.17□□□□□ -1.1
ERCC3P19447 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC8.17□□□□□ -1.1
ERCC3P19447 TRY2P-201ENST00000448860 689 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC8.17□□□□□ -1.1
ERCC3P19447 PTGES3P5-201ENST00000455109 434 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 AC096922.1-201ENST00000461635 651 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.17□□□□□ -1.1
ERCC3P19447 OR9A1P-202ENST00000484361 945 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC8.17□□□□□ -1.1
ERCC3P19447 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ERCC3P19447 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC8.17□□□□□ -1.1
ERCC3P19447 AC013701.1-201ENST00000522657 465 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC8.17□□□□□ -1.1
ERCC3P19447 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC8.17□□□□□ -1.1
ERCC3P19447 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC8.17□□□□□ -1.1
ERCC3P19447 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC8.17□□□□□ -1.1
ERCC3P19447 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC8.17□□□□□ -1.1
ERCC3P19447 NDUFA5P11-201ENST00000567995 343 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 AC090826.1-203ENST00000569235 490 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.17□□□□□ -1.1
ERCC3P19447 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC8.17□□□□□ -1.1
ERCC3P19447 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC8.17□□□□□ -1.1
ERCC3P19447 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ERCC3P19447 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC8.17□□□□□ -1.1
ERCC3P19447 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC8.17□□□□□ -1.1
ERCC3P19447 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC8.17□□□□□ -1.1
ERCC3P19447 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC8.17□□□□□ -1.1
ERCC3P19447 AC139713.2-210ENST00000641741 992 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms