Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CTLA4P16410 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.43□□□□□ -1.54
CTLA4P16410 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.43□□□□□ -1.54
CTLA4P16410 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.43□□□□□ -1.54
CTLA4P16410 LINC01613-201ENST00000561476 2780 ntBASIC5.43□□□□□ -1.54
CTLA4P16410 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CTLA4P16410 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.43□□□□□ -1.54
CTLA4P16410 RNA5SP375-201ENST00000362975 119 ntBASIC5.43□□□□□ -1.54
CTLA4P16410 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.43□□□□□ -1.54
CTLA4P16410 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.43□□□□□ -1.54
CTLA4P16410 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CTLA4P16410 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.43□□□□□ -1.54
CTLA4P16410 RPS26P38-201ENST00000414476 348 ntBASIC5.43□□□□□ -1.54
CTLA4P16410 PTCD2P2-201ENST00000415579 1095 ntBASIC5.43□□□□□ -1.54
CTLA4P16410 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.43□□□□□ -1.54
CTLA4P16410 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.43□□□□□ -1.54
CTLA4P16410 AC064862.5-201ENST00000440618 334 ntBASIC5.43□□□□□ -1.54
CTLA4P16410 AL512593.1-201ENST00000444758 779 ntBASIC5.43□□□□□ -1.54
CTLA4P16410 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.43□□□□□ -1.54
CTLA4P16410 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.43□□□□□ -1.54
CTLA4P16410 RPS7P10-201ENST00000464254 603 ntBASIC5.43□□□□□ -1.54
CTLA4P16410 RN7SL352P-201ENST00000466002 277 ntBASIC5.43□□□□□ -1.54
CTLA4P16410 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.43□□□□□ -1.54
CTLA4P16410 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.43□□□□□ -1.54
CTLA4P16410 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CTLA4P16410 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.43□□□□□ -1.54
CTLA4P16410 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.43□□□□□ -1.54
CTLA4P16410 RN7SKP67-201ENST00000515905 235 ntBASIC5.43□□□□□ -1.54
CTLA4P16410 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.43□□□□□ -1.54
CTLA4P16410 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.43□□□□□ -1.54
CTLA4P16410 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.43□□□□□ -1.54
CTLA4P16410 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.43□□□□□ -1.54
CTLA4P16410 AC011891.2-201ENST00000604949 397 ntBASIC5.43□□□□□ -1.54
CTLA4P16410 RPSAP75-201ENST00000605848 301 ntBASIC5.43□□□□□ -1.54
CTLA4P16410 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.43□□□□□ -1.54
CTLA4P16410 AC069234.4-201ENST00000621276 412 ntBASIC5.43□□□□□ -1.54
CTLA4P16410 MIR6823-201ENST00000622118 61 ntBASIC5.43□□□□□ -1.54
CTLA4P16410 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
CTLA4P16410 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CTLA4P16410 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.43□□□□□ -1.54
CTLA4P16410 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CTLA4P16410 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.43□□□□□ -1.54
CTLA4P16410 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CTLA4P16410 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.43□□□□□ -1.54
CTLA4P16410 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTLA4P16410 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CTLA4P16410 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTLA4P16410 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.42□□□□□ -1.54
CTLA4P16410 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CTLA4P16410 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTLA4P16410 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.42□□□□□ -1.54
CTLA4P16410 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.42□□□□□ -1.54
CTLA4P16410 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CTLA4P16410 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CTLA4P16410 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTLA4P16410 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CTLA4P16410 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTLA4P16410 MIR551B-201ENST00000384984 96 ntBASIC5.42□□□□□ -1.54
CTLA4P16410 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CTLA4P16410 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTLA4P16410 AL096800.1-201ENST00000405326 893 ntBASIC5.42□□□□□ -1.54
CTLA4P16410 RN7SKP144-201ENST00000411108 279 ntBASIC5.42□□□□□ -1.54
CTLA4P16410 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.42□□□□□ -1.54
CTLA4P16410 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.42□□□□□ -1.54
CTLA4P16410 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTLA4P16410 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.42□□□□□ -1.54
CTLA4P16410 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.42□□□□□ -1.54
CTLA4P16410 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.42□□□□□ -1.54
CTLA4P16410 IGLV3-4-201ENST00000432300 244 ntBASIC5.42□□□□□ -1.54
CTLA4P16410 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.42□□□□□ -1.54
CTLA4P16410 LINC00328-2P-201ENST00000436585 219 ntBASIC5.42□□□□□ -1.54
CTLA4P16410 AC010086.1-201ENST00000437359 1052 ntBASIC5.42□□□□□ -1.54
CTLA4P16410 OR3D1P-201ENST00000438288 955 ntBASIC5.42□□□□□ -1.54
CTLA4P16410 RPL12P49-201ENST00000441100 121 ntBASIC5.42□□□□□ -1.54
CTLA4P16410 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.42□□□□□ -1.54
CTLA4P16410 AL645936.1-201ENST00000441979 518 ntBASIC5.42□□□□□ -1.54
CTLA4P16410 RPL23AP60-201ENST00000450011 454 ntBASIC5.42□□□□□ -1.54
CTLA4P16410 H3F3AP5-201ENST00000475267 429 ntBASIC5.42□□□□□ -1.54
CTLA4P16410 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.42□□□□□ -1.54
CTLA4P16410 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.42□□□□□ -1.54
CTLA4P16410 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.42□□□□□ -1.54
CTLA4P16410 HMGN1P16-201ENST00000508308 283 ntBASIC5.42□□□□□ -1.54
CTLA4P16410 AC095052.1-201ENST00000509955 863 ntBASIC5.42□□□□□ -1.54
CTLA4P16410 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.42□□□□□ -1.54
CTLA4P16410 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms