Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 BRD9P1-201ENST00000529855 560 ntBASIC3.64□□□□□ -1.83
APOBP04114 AC063949.1-201ENST00000552900 865 ntBASIC3.64□□□□□ -1.83
APOBP04114 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
APOBP04114 CASC22-201ENST00000569713 386 ntTSL 5 BASIC3.64□□□□□ -1.83
APOBP04114 AC209154.1-201ENST00000582156 337 ntBASIC3.64□□□□□ -1.83
APOBP04114 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 AC006116.3-201ENST00000592968 361 ntBASIC3.64□□□□□ -1.83
APOBP04114 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.64□□□□□ -1.83
APOBP04114 AC000068.2-201ENST00000608816 460 ntBASIC3.64□□□□□ -1.83
APOBP04114 AC109583.2-201ENST00000617367 129 ntBASIC3.64□□□□□ -1.83
APOBP04114 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
APOBP04114 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC3.64□□□□□ -1.83
APOBP04114 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 ZNF101P1-201ENST00000435701 1720 ntBASIC3.64□□□□□ -1.83
APOBP04114 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
APOBP04114 OR2AM1P-201ENST00000422137 422 ntBASIC3.64□□□□□ -1.83
APOBP04114 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC3.64□□□□□ -1.83
APOBP04114 OR2AO1P-201ENST00000476497 403 ntBASIC3.64□□□□□ -1.83
APOBP04114 RN7SL570P-201ENST00000484405 292 ntBASIC3.64□□□□□ -1.83
APOBP04114 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC3.64□□□□□ -1.83
APOBP04114 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
APOBP04114 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC3.64□□□□□ -1.83
APOBP04114 AC012618.3-205ENST00000637896 1496 ntBASIC3.64□□□□□ -1.83
APOBP04114 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBP04114 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
APOBP04114 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 YES1P1-201ENST00000418510 1628 ntBASIC3.63□□□□□ -1.83
APOBP04114 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
APOBP04114 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC3.63□□□□□ -1.83
APOBP04114 AC019185.1-201ENST00000442718 389 ntBASIC3.63□□□□□ -1.83
APOBP04114 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC3.63□□□□□ -1.83
APOBP04114 OR7A15P-201ENST00000449848 1009 ntBASIC3.63□□□□□ -1.83
APOBP04114 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC3.63□□□□□ -1.83
APOBP04114 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.63□□□□□ -1.83
APOBP04114 RPL7P39-201ENST00000481157 744 ntBASIC3.63□□□□□ -1.83
APOBP04114 AC090142.2-201ENST00000483263 416 ntBASIC3.63□□□□□ -1.83
APOBP04114 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC3.63□□□□□ -1.83
APOBP04114 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC3.63□□□□□ -1.83
APOBP04114 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC3.63□□□□□ -1.83
APOBP04114 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC3.63□□□□□ -1.83
APOBP04114 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
APOBP04114 AC092821.3-202ENST00000641304 2767 ntBASIC3.63□□□□□ -1.83
APOBP04114 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
APOBP04114 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
APOBP04114 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
APOBP04114 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
APOBP04114 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC3.63□□□□□ -1.83
APOBP04114 CRP-204ENST00000368112 787 ntTSL 2 BASIC3.63□□□□□ -1.83
APOBP04114 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
APOBP04114 AL133325.1-201ENST00000421090 382 ntBASIC3.63□□□□□ -1.83
APOBP04114 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC3.63□□□□□ -1.83
APOBP04114 RPL32P33-201ENST00000487023 394 ntBASIC3.63□□□□□ -1.83
APOBP04114 AL035690.1-201ENST00000490892 383 ntBASIC3.63□□□□□ -1.83
APOBP04114 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
APOBP04114 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
APOBP04114 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC3.63□□□□□ -1.83
APOBP04114 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC3.63□□□□□ -1.83
APOBP04114 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
APOBP04114 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
APOBP04114 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 NAV2-208ENST00000527559 11171 ntTSL 5 BASIC3.63□□□□□ -1.83
APOBP04114 AC110048.2-201ENST00000617013 6721 ntBASIC3.63□□□□□ -1.83
APOBP04114 RMST-210ENST00000640149 2844 ntTSL 5 BASIC3.63□□□□□ -1.83
APOBP04114 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC3.63□□□□□ -1.83
APOBP04114 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
APOBP04114 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.63□□□□□ -1.83
APOBP04114 CUBNP2-201ENST00000443534 1139 ntBASIC3.63□□□□□ -1.83
APOBP04114 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC3.63□□□□□ -1.83
APOBP04114 AC092324.1-201ENST00000468671 324 ntBASIC3.63□□□□□ -1.83
APOBP04114 PRELID3BP5-201ENST00000508612 460 ntBASIC3.63□□□□□ -1.83
APOBP04114 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.63□□□□□ -1.83
APOBP04114 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.63□□□□□ -1.83
APOBP04114 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBP04114 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms