Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.77□□□□□ -1.33
VTNP04004 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.77□□□□□ -1.33
VTNP04004 AC009237.1-201ENST00000442127 744 ntBASIC6.77□□□□□ -1.33
VTNP04004 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
VTNP04004 RNA5SP400-201ENST00000517155 111 ntBASIC6.77□□□□□ -1.33
VTNP04004 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.77□□□□□ -1.33
VTNP04004 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.77□□□□□ -1.33
VTNP04004 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.77□□□□□ -1.33
VTNP04004 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.77□□□□□ -1.33
VTNP04004 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.77□□□□□ -1.33
VTNP04004 AC008521.2-201ENST00000591021 259 ntBASIC6.77□□□□□ -1.33
VTNP04004 AC100767.2-201ENST00000604840 693 ntBASIC6.77□□□□□ -1.33
VTNP04004 AC026124.2-201ENST00000621847 656 ntBASIC6.77□□□□□ -1.33
VTNP04004 AL136228.1-201ENST00000622221 319 ntBASIC6.77□□□□□ -1.33
VTNP04004 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.77□□□□□ -1.33
VTNP04004 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VTNP04004 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
VTNP04004 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VTNP04004 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.77□□□□□ -1.33
VTNP04004 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VTNP04004 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VTNP04004 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VTNP04004 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.77□□□□□ -1.33
VTNP04004 AC009135.2-201ENST00000624136 1768 ntBASIC6.77□□□□□ -1.33
VTNP04004 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VTNP04004 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
VTNP04004 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.76□□□□□ -1.33
VTNP04004 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VTNP04004 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.76□□□□□ -1.33
VTNP04004 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.76□□□□□ -1.33
VTNP04004 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
VTNP04004 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.76□□□□□ -1.33
VTNP04004 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.76□□□□□ -1.33
VTNP04004 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
VTNP04004 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VTNP04004 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
VTNP04004 RNA5SP375-201ENST00000362975 119 ntBASIC6.76□□□□□ -1.33
VTNP04004 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
VTNP04004 MIR323B-201ENST00000385269 82 ntBASIC6.76□□□□□ -1.33
VTNP04004 RNU11-6P-201ENST00000391127 133 ntBASIC6.76□□□□□ -1.33
VTNP04004 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VTNP04004 AL096711.1-201ENST00000404780 554 ntBASIC6.76□□□□□ -1.33
VTNP04004 AC068138.1-201ENST00000412635 217 ntBASIC6.76□□□□□ -1.33
VTNP04004 AL096829.1-201ENST00000413677 457 ntBASIC6.76□□□□□ -1.33
VTNP04004 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.76□□□□□ -1.33
VTNP04004 AC011742.2-201ENST00000443818 352 ntBASIC6.76□□□□□ -1.33
VTNP04004 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.76□□□□□ -1.33
VTNP04004 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.76□□□□□ -1.33
VTNP04004 CFL1P4-201ENST00000451536 498 ntBASIC6.76□□□□□ -1.33
VTNP04004 AC073594.1-201ENST00000462065 364 ntBASIC6.76□□□□□ -1.33
VTNP04004 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.76□□□□□ -1.33
VTNP04004 IGHV1-14-201ENST00000523391 241 ntBASIC6.76□□□□□ -1.33
VTNP04004 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.76□□□□□ -1.33
VTNP04004 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.76□□□□□ -1.33
VTNP04004 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
VTNP04004 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.76□□□□□ -1.33
VTNP04004 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.76□□□□□ -1.33
VTNP04004 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.76□□□□□ -1.33
VTNP04004 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.76□□□□□ -1.33
VTNP04004 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.76□□□□□ -1.33
VTNP04004 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.76□□□□□ -1.33
VTNP04004 MIR3189-201ENST00000578735 73 ntBASIC6.76□□□□□ -1.33
VTNP04004 RNU4ATAC-201ENST00000580972 127 ntBASIC6.76□□□□□ -1.33
VTNP04004 MIR3614-201ENST00000581261 86 ntBASIC6.76□□□□□ -1.33
VTNP04004 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.76□□□□□ -1.33
VTNP04004 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.76□□□□□ -1.33
VTNP04004 AL645933.2-201ENST00000606743 1207 ntBASIC6.76□□□□□ -1.33
VTNP04004 MIR6862-1-201ENST00000613016 70 ntBASIC6.76□□□□□ -1.33
VTNP04004 MIR6862-2-201ENST00000614755 70 ntBASIC6.76□□□□□ -1.33
VTNP04004 AL137067.2-201ENST00000621202 131 ntBASIC6.76□□□□□ -1.33
VTNP04004 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.76□□□□□ -1.33
VTNP04004 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.76□□□□□ -1.33
VTNP04004 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VTNP04004 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VTNP04004 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.76□□□□□ -1.33
VTNP04004 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VTNP04004 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VTNP04004 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.76□□□□□ -1.33
VTNP04004 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.76□□□□□ -1.33
VTNP04004 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.76□□□□□ -1.33
VTNP04004 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VTNP04004 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
VTNP04004 AL731556.1-201ENST00000394628 3711 ntBASIC6.75□□□□□ -1.33
VTNP04004 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
VTNP04004 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.75□□□□□ -1.33
VTNP04004 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VTNP04004 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.75□□□□□ -1.33
VTNP04004 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.75□□□□□ -1.33
VTNP04004 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
VTNP04004 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VTNP04004 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
VTNP04004 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
VTNP04004 RN7SKP78-201ENST00000364711 318 ntBASIC6.75□□□□□ -1.33
VTNP04004 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
VTNP04004 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
VTNP04004 AC092642.1-201ENST00000392417 425 ntBASIC6.75□□□□□ -1.33
VTNP04004 AL354890.1-201ENST00000413730 346 ntBASIC6.75□□□□□ -1.33
VTNP04004 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.75□□□□□ -1.33
VTNP04004 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.75□□□□□ -1.33
VTNP04004 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms