Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.68□□□□□ -1.34
O00370 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.68□□□□□ -1.34
O00370 AC022726.2-201ENST00000634673 547 ntBASIC6.68□□□□□ -1.34
O00370 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
O00370 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
O00370 AL359976.1-201ENST00000418655 3528 ntBASIC6.68□□□□□ -1.34
O00370 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
O00370 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.68□□□□□ -1.34
O00370 AC010329.1-201ENST00000593903 8328 ntBASIC6.68□□□□□ -1.34
O00370 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
O00370 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.68□□□□□ -1.34
O00370 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
O00370 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
O00370 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.67□□□□□ -1.34
O00370 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
O00370 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.67□□□□□ -1.34
O00370 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
O00370 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
O00370 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.67□□□□□ -1.34
O00370 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
O00370 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
O00370 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
O00370 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
O00370 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.67□□□□□ -1.34
O00370 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
O00370 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.67□□□□□ -1.34
O00370 RN7SKP121-201ENST00000410842 305 ntBASIC6.67□□□□□ -1.34
O00370 RN7SKP161-201ENST00000411110 305 ntBASIC6.67□□□□□ -1.34
O00370 POU5F1P5-201ENST00000445059 658 ntBASIC6.67□□□□□ -1.34
O00370 MORF4-201ENST00000447135 971 ntBASIC6.67□□□□□ -1.34
O00370 AL133351.3-201ENST00000454998 193 ntBASIC6.67□□□□□ -1.34
O00370 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.67□□□□□ -1.34
O00370 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.67□□□□□ -1.34
O00370 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.67□□□□□ -1.34
O00370 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.67□□□□□ -1.34
O00370 DPPA3P2-202ENST00000557188 1219 ntBASIC6.67□□□□□ -1.34
O00370 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.67□□□□□ -1.34
O00370 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.67□□□□□ -1.34
O00370 AC069542.2-201ENST00000624816 216 ntBASIC6.67□□□□□ -1.34
O00370 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.67□□□□□ -1.34
O00370 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
O00370 AL133243.2-201ENST00000610331 1621 ntBASIC6.67□□□□□ -1.34
O00370 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
O00370 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.67□□□□□ -1.34
O00370 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
O00370 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
O00370 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
O00370 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
O00370 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.34
O00370 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
O00370 AC093297.3-201ENST00000607056 2517 ntBASIC6.67□□□□□ -1.34
O00370 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.66□□□□□ -1.34
O00370 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
O00370 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.66□□□□□ -1.34
O00370 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.66□□□□□ -1.34
O00370 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
O00370 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.66□□□□□ -1.34
O00370 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
O00370 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
O00370 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
O00370 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
O00370 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
O00370 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
O00370 RNA5SP346-201ENST00000363541 121 ntBASIC6.66□□□□□ -1.34
O00370 AL445238.1-204ENST00000400311 463 ntBASIC6.66□□□□□ -1.34
O00370 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
O00370 AC096632.2-201ENST00000438139 1239 ntBASIC6.66□□□□□ -1.34
O00370 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
O00370 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
O00370 AC007383.1-201ENST00000445875 636 ntBASIC6.66□□□□□ -1.34
O00370 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.66□□□□□ -1.34
O00370 RPS27AP3-201ENST00000453803 454 ntBASIC6.66□□□□□ -1.34
O00370 VPS25P1-201ENST00000455691 508 ntBASIC6.66□□□□□ -1.34
O00370 AC114728.1-201ENST00000488289 483 ntBASIC6.66□□□□□ -1.34
O00370 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
O00370 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.66□□□□□ -1.34
O00370 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.66□□□□□ -1.34
O00370 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.66□□□□□ -1.34
O00370 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.66□□□□□ -1.34
O00370 AC027229.1-201ENST00000583887 253 ntBASIC6.66□□□□□ -1.34
O00370 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.66□□□□□ -1.34
O00370 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.66□□□□□ -1.34
O00370 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.66□□□□□ -1.34
O00370 AC006924.1-201ENST00000610750 559 ntBASIC6.66□□□□□ -1.34
O00370 AC010998.3-201ENST00000613871 631 ntBASIC6.66□□□□□ -1.34
O00370 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.66□□□□□ -1.34
O00370 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.66□□□□□ -1.34
O00370 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.66□□□□□ -1.34
O00370 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
O00370 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
O00370 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
O00370 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
O00370 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
O00370 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
O00370 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
O00370 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
O00370 AL353763.1-201ENST00000624467 1628 ntBASIC6.65□□□□□ -1.34
O00370 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
O00370 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
O00370 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms