Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 RNU4-24P-201ENST00000364565 139 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 Y_RNA.505-201ENST00000384489 102 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 EMC3-AS1-205ENST00000438698 534 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AC092170.1-201ENST00000440211 356 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 MTND2P4-201ENST00000445034 1004 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AL035407.2-201ENST00000454090 378 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 MTND4P2-201ENST00000507767 1203 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AC111000.2-201ENST00000507775 550 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 MTCYBP44-201ENST00000514835 823 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 RNA5SP441-201ENST00000516809 88 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 OR52K3P-201ENST00000531655 943 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 RFPL1S-203ENST00000539579 330 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AC023161.2-201ENST00000551218 780 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AC051619.2-201ENST00000559063 397 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AC087465.1-201ENST00000560574 245 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AL078601.3-201ENST00000573303 535 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AL031123.2-201ENST00000563225 3325 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 MAPK10-329ENST00000641555 2656 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 AC017007.4-201ENST00000503353 1352 ntBASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
TMEM88BA6NKF7 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.08
TMEM88BA6NKF7 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC8.34□□□□□ -1.08
TMEM88BA6NKF7 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 AC138409.1-201ENST00000505001 3598 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 SNORA70G-201ENST00000383923 142 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 SNORD116-4-201ENST00000384733 96 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 MIR575-201ENST00000385013 94 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 SNORA77.2-201ENST00000408571 112 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 BTF3L4P1-201ENST00000413813 468 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 AC099782.1-201ENST00000425889 474 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 AC018804.1-201ENST00000430381 618 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 Z84478.1-201ENST00000438230 1219 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 AC002542.1-201ENST00000440683 193 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 MTND6P5-201ENST00000448266 512 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 H3F3AP5-201ENST00000475267 429 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 GCSHP1-201ENST00000512554 484 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 AC117532.1-201ENST00000514638 323 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 FABP5P12-201ENST00000515543 389 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 OR4C7P-201ENST00000533375 919 ntBASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC8.33□□□□□ -1.08
TMEM88BA6NKF7 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms