Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AC010442.1-201ENST00000515583 816 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AC134669.1-201ENST00000581275 672 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AL590032.1-201ENST00000604920 252 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AC063944.3-201ENST00000609969 533 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AL050303.3-201ENST00000613704 284 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AL645927.2-201ENST00000618350 349 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AL591926.1-201ENST00000620542 217 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AC073593.1-201ENST00000624500 411 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 SNORA16A-202ENST00000628458 135 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 OR4G3P-201ENST00000633500 913 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AC006927.4-201ENST00000639187 543 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 MAPK10-365ENST00000641902 3825 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 RNU1-55P-201ENST00000365510 158 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 RNA5SP474-201ENST00000391234 90 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC009500.1-201ENST00000420684 583 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AL139158.1-201ENST00000424719 340 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 RPS10P21-201ENST00000430654 475 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 RPS26P4-201ENST00000431743 355 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 FABP5P2-201ENST00000439042 408 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 Z99127.2-201ENST00000441426 334 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC016724.1-201ENST00000453215 421 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 MTATP6P14-201ENST00000455189 673 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC063943.2-201ENST00000495697 534 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC106822.1-201ENST00000502647 526 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 FABP5P6-201ENST00000510588 409 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 MT1CP-201ENST00000567054 174 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 MIR3154-201ENST00000577829 84 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC012368.3-201ENST00000604190 219 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC034236.3-201ENST00000605999 461 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC018754.1-201ENST00000607486 925 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 MIR6071-201ENST00000616741 78 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC025016.1-201ENST00000616746 682 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC089999.3-201ENST00000622440 577 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 MAPK10-350ENST00000641777 965 ntBASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 MAPK10-357ENST00000641831 2858 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms