Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC093829.1-201ENST00000506662 1618 ntBASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 AC114876.1-201ENST00000490962 1366 ntBASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 COX6B1P3-201ENST00000312310 260 ntBASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 RPA3-204ENST00000406109 434 ntTSL 3 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 CCNB1IP1P1-201ENST00000428976 839 ntBASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 AC069154.1-201ENST00000432914 542 ntBASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 RPL6P30-201ENST00000443382 862 ntBASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 AL049779.3-201ENST00000557141 606 ntBASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 AC007494.1-201ENST00000562293 760 ntBASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 AC090236.2-201ENST00000587933 1101 ntBASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 AC108865.2-201ENST00000606881 432 ntBASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 AL365181.4-201ENST00000609800 547 ntBASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 MTCO1P28-201ENST00000574177 1528 ntBASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC8.25□□□□□ -1.09
NPC1L1Q9UHC9 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 AL445466.1-201ENST00000448432 357 ntBASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 AC094085.1-201ENST00000468914 584 ntBASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 AC092865.4-201ENST00000477936 615 ntBASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 CBX1-205ENST00000495350 550 ntTSL 2 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 RPA2P1-201ENST00000556557 721 ntBASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 AC091167.5-201ENST00000605689 894 ntBASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 AL136131.3-201ENST00000607600 188 ntBASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 AL136228.1-201ENST00000622221 319 ntBASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 LINC02035-201ENST00000610128 5476 ntBASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 CREM-203ENST00000344351 1625 ntTSL 2 BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NPC1L1Q9UHC9 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms